RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 KCNJ6P48051 423 aa16.75■□□□□ 0.27
PCDHA4-203ENST00000530339 SLC12A2P55011 1212 aa16.75■□□□□ 0.27
PCDHA4-203ENST00000530339 GLG1Q92896 1179 aa16.75■□□□□ 0.27
PCDHA4-203ENST00000530339 TPX2Q9ULW0 747 aaKnown RBP16.75■□□□□ 0.27
PCDHA4-203ENST00000530339 MRFAP1Q9Y605 127 aa16.75■□□□□ 0.27
PCDHA4-203ENST00000530339 SETSIPP0DME0 302 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 RFC1P35251 1148 aaPredicted RBP16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 KRT81Q14533 505 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 DGKHQ86XP1 1220 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 MAP7D3Q8IWC1 876 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 ACCSQ96QU6 501 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 NACC1Q96RE7 527 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 ZNF277Q9NRM2 450 aaPredicted RBP16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 RASGRF2O14827 1237 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 TFDP1Q14186 410 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 PPP2R5DQ14738 602 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 PI16Q6UXB8 463 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 CDHR1Q96JP9 859 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 VCX3AQ9NNX9 186 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 GGCXP38435 758 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 SPOUT1Q5T280 376 aaKnown RBP16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 RIOK1Q9BRS2 568 aaKnown RBP16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 NACA2Q9H009 215 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 MLXIPQ9HAP2 919 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 TESPA1A2RU30 521 aaPredicted RBP16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 LGALS16A8MUM7 142 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 TADA3O75528 432 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 USP14P54578 494 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 BIRC2Q13490 618 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 SCYL3Q8IZE3 742 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 ANKRD7Q92527 254 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 DISC1Q9NRI5 854 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 SETBP1Q9Y6X0 1596 aa16.74■□□□□ 0.27
PCDHA4-203ENST00000530339 PRAMEF22A3QJZ6 481 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 PRR36Q9H6K5 1346 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 ODR4Q5SWX8 454 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 FAM186BQ8IYM0 893 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 QTRT2Q9H974 415 aaKnown RBP16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 GJB4Q9NTQ9 266 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 HESX1Q9UBX0 185 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 THRAP3Q9Y2W1 955 aaKnown RBP16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 ALAS1P13196 640 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 PLCG1P19174 1290 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 CYP4A11Q02928 519 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 PRKG1Q13976 671 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 RINT1Q6NUQ1 792 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 TRIM42Q8IWZ5 723 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 TBCKQ8TEA7 893 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 CCDC127Q96BQ5 260 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 CDC42BPBQ9Y5S2 1711 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 RNF8O76064 485 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 SGO2Q562F6 1265 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 C6orf118Q5T5N4 469 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 CLEC4GQ6UXB4 293 aa16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 DIS3Q9Y2L1 958 aaKnown RBP16.73■□□□□ 0.27
PCDHA4-203ENST00000530339 GOLGA8QA0A0J9YX86 632 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 GOLGA8OA6NCC3 632 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 GOLGA8NF8WBI6 632 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 PRKAB2O43741 272 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 TAF11Q15544 211 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 ZMYND12Q9H0C1 365 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 PLAAQ9Y263 795 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 NBPF9Q3BBW0 867 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 HSP90AA5PQ58FG0 334 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 LCORLQ8N3X6 602 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 PPP1R9AQ9ULJ8 1098 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 SLCO1A2P46721 670 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 ARHGAP4P98171 946 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 ADCY2Q08462 1091 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 USPL1Q5W0Q7 1092 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 RNF168Q8IYW5 571 aaPredicted RBP16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 GINS2Q9Y248 185 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 ZBTB1Q9Y2K1 713 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 GDAQ9Y2T3 454 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 TMOD1P28289 359 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 DR1Q01658 176 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 TRIM50Q86XT4 487 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 GSDMBQ8TAX9 411 aa16.72■□□□□ 0.27
PCDHA4-203ENST00000530339 PPEF1O14829 653 aaPredicted RBP16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 XPOTO43592 962 aaKnown RBP16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 SRGAP2O75044 1071 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 TMEM191BP0C7N4 346 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 GARSP41250 739 aaKnown RBP16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 EPC1Q9H2F5 836 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 ADAMTS1Q9UHI8 967 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 LCMT1Q9UIC8 334 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 CCPG1Q9ULG6 757 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 CLTCL1P53675 1640 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 BSPRYQ5W0U4 402 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 ZNF653Q96CK0 615 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 BSDC1Q9NW68 430 aaPredicted RBP16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 SPHKAPQ2M3C7 1700 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 YARSP54577 528 aaKnown RBP16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 CCNA1P78396 465 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 ALKBH5Q6P6C2 394 aaKnown RBP16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 TUBB6Q9BUF5 446 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 NBPF3Q9H094 633 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 PFDN4Q9NQP4 134 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 ST7Q9NRC1 585 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 ANAPC5Q9UJX4 755 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms