RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 ARTNQ5T4W7 220 aa6.88□□□□□ -1.31
AMBRA1-209ENST00000529963 ANGEL2Q5VTE6 544 aaKnown RBP6.88□□□□□ -1.31
AMBRA1-209ENST00000529963 CWF19L1Q69YN2 538 aaKnown RBP6.88□□□□□ -1.31
AMBRA1-209ENST00000529963 ZNF227Q86WZ6 799 aa6.88□□□□□ -1.31
AMBRA1-209ENST00000529963 ARHGEF39Q8N4T4 335 aa6.88□□□□□ -1.31
AMBRA1-209ENST00000529963 FLAD1Q8NFF5 587 aa6.88□□□□□ -1.31
AMBRA1-209ENST00000529963 DIS3Q9Y2L1 958 aaKnown RBP6.88□□□□□ -1.31
AMBRA1-209ENST00000529963 PALLDQ8WX93 1383 aa6.88□□□□□ -1.31
AMBRA1-209ENST00000529963 DNAJC25-GNG10A0A024R161 153 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 A0A087WZG4 1122 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 STXBP3O00186 592 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 HMGB1P09429 215 aaKnown RBP6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 NAT2P11245 290 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 IFNGR1P15260 489 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 VAV1P15498 845 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 RPL10P27635 214 aaKnown RBP6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 ZNF143P52747 638 aaPredicted RBP6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 PCBP3P57721 371 aaKnown RBP6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 RASGRF1Q13972 1273 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 PLCL1Q15111 1095 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 HSP90AB2PQ58FF8 381 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 RALGPS1Q5JS13 557 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 COL23A1Q86Y22 540 aaPredicted RBP6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 NLGN2Q8NFZ4 835 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 BTN2A2Q8WVV5 523 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 RCC1LQ96I51 464 aaKnown RBP6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 PRR13Q9NZ81 148 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 SLAMF8Q9P0V8 285 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 ADAMTS6Q9UKP5 1117 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 SF3B6Q9Y3B4 125 aaKnown RBP6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 EMC9Q9Y3B6 208 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 COL24A1Q17RW2 1714 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 RGPD2P0DJD1 1756 aa6.87□□□□□ -1.31
AMBRA1-209ENST00000529963 A0A1W2PQU0 124 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 NOP56O00567 594 aaKnown RBP6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 GSNP06396 782 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 GSTM1P09488 218 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 YBX3P16989 372 aaKnown RBP eCLIP6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 GRIA2P42262 883 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 TEKQ02763 1124 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 SF1Q15637 639 aaKnown RBP6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 C16orf71Q8IYS4 520 aaPredicted RBP6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 LINC00116Q8NCU8 138 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 MKL1Q969V6 931 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 FCRL3Q96P31 734 aaPredicted RBP6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 CDADC1Q9BWV3 514 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 SLC12A9Q9BXP2 914 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 ADAMTS10Q9H324 1103 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 ZFP64Q9NPA5 681 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 AP5S1Q9NUS5 200 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 ZMYM5Q9UJ78 669 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 TUBGCP6Q96RT7 1819 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 NSD3Q9BZ95 1437 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 PPM1GO15355 546 aaPredicted RBP6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 CYP27B1O15528 508 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 FUT4P22083 530 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 BMP8BP34820 402 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 SSRP1Q08945 709 aaKnown RBP6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 IFRD2Q12894 506 aaPredicted RBP6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 RTP2Q5QGT7 225 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 TRIM59Q8IWR1 403 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 ST13P5Q8NFI4 369 aaPredicted RBP6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 PI4K2BQ8TCG2 481 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 MRFAP1L1Q96HT8 127 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 MRGPRX3Q96LB0 322 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 EBF1Q9UH73 591 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 CD2APQ9Y5K6 639 aa6.86□□□□□ -1.31
AMBRA1-209ENST00000529963 KIF20BQ96Q89 1820 aa6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 TMEM82A0PJX8 343 aa6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 GP2P55259 537 aaKnown RBP6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 PPP2R2AP63151 447 aa6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 POU4F1Q01851 419 aa6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 FSTL1Q12841 308 aa6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 NFE2L2Q16236 605 aa6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 YOD1Q5VVQ6 348 aaPredicted RBP6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 GTF2IRD2BQ6EKJ0 949 aa6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 RNF111Q6ZNA4 994 aa6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 GTF2IRD2Q86UP8 949 aa6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 LILRB2Q8N423 598 aa6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 KDM2BQ8NHM5 1336 aa6.85□□□□□ -1.31
AMBRA1-209ENST00000529963 C5P01031 1676 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 AGRPO00253 132 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 ZNF205O95201 554 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 RNASE1P07998 156 aaKnown RBP6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 HK2P52789 917 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 AMPD2Q01433 879 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 ABI1Q8IZP0 508 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 PIGBQ92521 554 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 SPATA9Q9BWV2 254 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 EPN3Q9H201 632 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 KANSL2Q9H9L4 492 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 MBNL3Q9NUK0 354 aaKnown RBP6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 LMCD1Q9NZU5 365 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 WASHC2AQ641Q2 1341 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 NCAPD2Q15021 1401 aa6.84□□□□□ -1.31
AMBRA1-209ENST00000529963 FAM153BP0C7A2 387 aa6.83□□□□□ -1.32
AMBRA1-209ENST00000529963 HSPA1AP0DMV8 641 aaKnown RBP6.83□□□□□ -1.32
AMBRA1-209ENST00000529963 HSPA1BP0DMV9 641 aaKnown RBP6.83□□□□□ -1.32
AMBRA1-209ENST00000529963 PRSS53Q2L4Q9 553 aa6.83□□□□□ -1.32
AMBRA1-209ENST00000529963 ZNF792Q3KQV3 632 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms