RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 PSEN2P49810 448 aa17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 ZNF697Q5TEC3 545 aa17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 CCDC12Q8WUD4 166 aaPredicted RBP17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 CDX2Q99626 313 aaPredicted RBP17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 C16orf70Q9BSU1 422 aa17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 PPP1R12CQ9BZL4 782 aa17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 MLXIPQ9HAP2 919 aa17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 JADE2Q9NQC1 790 aa17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 TRMT13Q9NUP7 481 aaKnown RBP17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 RTEL1Q9NZ71 1219 aa17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 GTF2IRD1Q9UHL9 959 aa17.7■□□□□ 0.42
CCDC90B-215ENST00000529745 CSF2RAP15509 400 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 KCNA2P16389 499 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 CYP2C18P33260 490 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 SREBF1P36956 1147 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 RBL2Q08999 1139 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 RASIP1Q5U651 963 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 C16orf59Q7L2K0 433 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 FAM177A1Q8N128 213 aaPredicted RBP17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 CRYGNQ8WXF5 182 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 CTAGE1Q96RT6 745 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 ANO3Q9BYT9 981 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 WNT8AQ9H1J5 351 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 IL23AQ9NPF7 189 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 PDRG1Q9NUG6 133 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 UMODL1Q5DID0 1318 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 KAT6AQ92794 2004 aa17.69■□□□□ 0.42
CCDC90B-215ENST00000529745 TNFRSF10AO00220 468 aa17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 HOXC8P31273 242 aa17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 MFSD10Q14728 455 aa17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 FAM47CQ5HY64 1035 aa17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 TMEM240Q5SV17 173 aa17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 PSRC1Q6PGN9 363 aaPredicted RBP17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 CYFIP1Q7L576 1253 aa17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 PHKBQ93100 1093 aa17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 FAM122AQ96E09 287 aa17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 GPR20Q99678 358 aa17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 MXRA8Q9BRK3 442 aa17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 BCAS3Q9H6U6 928 aa17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 SH3GLB2Q9NR46 395 aa17.68■□□□□ 0.42
CCDC90B-215ENST00000529745 LGALS2P05162 132 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 PFKMP08237 780 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 ZNF286BP0CG31 522 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 GNA11P29992 359 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 CCT2P78371 535 aaKnown RBP17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 SMAD3P84022 425 aaKnown RBP17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 AKAP17AQ02040 695 aaKnown RBP17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 MTMR1Q13613 665 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 KIAA0753Q2KHM9 967 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 GDF6Q6KF10 455 aaPredicted RBP17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 NIPA1Q7RTP0 329 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 CCDC148Q8NFR7 591 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 CAGE1Q8TC20 777 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 VWCEQ96DN2 955 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 NCOA5Q9HCD5 579 aaKnown RBP17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 C6orf50Q9HD87 102 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 HDAC6Q9UBN7 1215 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 GBF1Q92538 1859 aa17.67■□□□□ 0.42
CCDC90B-215ENST00000529745 WDR81Q562E7 1941 aa17.66■□□□□ 0.42
CCDC90B-215ENST00000529745 NOP56O00567 594 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-215ENST00000529745 ATP9AO75110 1047 aa17.66■□□□□ 0.42
CCDC90B-215ENST00000529745 CYP3A4P08684 503 aa17.66■□□□□ 0.42
CCDC90B-215ENST00000529745 CYP2C9P11712 490 aa17.66■□□□□ 0.42
CCDC90B-215ENST00000529745 RFC2P35250 354 aa17.66■□□□□ 0.42
CCDC90B-215ENST00000529745 PTGISQ16647 500 aa17.66■□□□□ 0.42
CCDC90B-215ENST00000529745 C7orf31Q8N865 590 aa17.66■□□□□ 0.42
CCDC90B-215ENST00000529745 RNPC3Q96LT9 517 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-215ENST00000529745 SLC26A6Q9BXS9 759 aa17.66■□□□□ 0.42
CCDC90B-215ENST00000529745 NFASCO94856 1347 aa17.66■□□□□ 0.42
CCDC90B-215ENST00000529745 H3BRB1 525 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 MEIS1O00470 390 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 DEXIO95424 95 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 BFSP2Q13515 415 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 ANKRD1Q15327 319 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 CEP55Q53EZ4 464 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 CPLX2Q6PUV4 134 aaKnown RBP17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 TRIM22Q8IYM9 498 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 RPUSD2Q8IZ73 545 aaKnown RBP17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 REXO1Q8N1G1 1221 aaKnown RBP17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 CCDC155Q8N6L0 562 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 BICD2Q8TD16 824 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 AFAP1L1Q8TED9 768 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 HERVK_113Q902F9 699 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 TUT1Q9H6E5 874 aaKnown RBP17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 KCNH7Q9NS40 1196 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 TMEM260Q9NX78 707 aa17.65■□□□□ 0.42
CCDC90B-215ENST00000529745 PARNO95453 639 aaKnown RBP17.64■□□□□ 0.41
CCDC90B-215ENST00000529745 CCL23P55773 120 aa17.64■□□□□ 0.41
CCDC90B-215ENST00000529745 ARHGAP4P98171 946 aa17.64■□□□□ 0.41
CCDC90B-215ENST00000529745 SSRP1Q08945 709 aaKnown RBP17.64■□□□□ 0.41
CCDC90B-215ENST00000529745 PTK7Q13308 1070 aa17.64■□□□□ 0.41
CCDC90B-215ENST00000529745 ZNF365Q70YC5 407 aa17.64■□□□□ 0.41
CCDC90B-215ENST00000529745 TET1Q8NFU7 2136 aa17.64■□□□□ 0.41
CCDC90B-215ENST00000529745 PPP1R13LQ8WUF5 828 aa17.64■□□□□ 0.41
CCDC90B-215ENST00000529745 DHX38Q92620 1227 aaKnown RBP17.64■□□□□ 0.41
CCDC90B-215ENST00000529745 PGBD1Q96JS3 809 aa17.64■□□□□ 0.41
CCDC90B-215ENST00000529745 ALG1Q9BT22 464 aa17.64■□□□□ 0.41
CCDC90B-215ENST00000529745 SEMA6BQ9H3T3 888 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms