RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 C7orf31Q8N865 590 aa15□□□□□ -0.01
SSH3-206ENST00000529224 GPRASP2Q96D09 838 aa15□□□□□ -0.01
SSH3-206ENST00000529224 CDHR1Q96JP9 859 aa15□□□□□ -0.01
SSH3-206ENST00000529224 SENP7Q9BQF6 1050 aa15□□□□□ -0.01
SSH3-206ENST00000529224 MTIF3Q9H2K0 278 aaKnown RBP15□□□□□ -0.01
SSH3-206ENST00000529224 RIC8AQ9NPQ8 531 aa15□□□□□ -0.01
SSH3-206ENST00000529224 BARHL2Q9NY43 387 aa15□□□□□ -0.01
SSH3-206ENST00000529224 CXXC1Q9P0U4 656 aaPredicted RBP15□□□□□ -0.01
SSH3-206ENST00000529224 PCDHA6Q9UN73 950 aa15□□□□□ -0.01
SSH3-206ENST00000529224 PCDHA8Q9Y5H6 950 aa15□□□□□ -0.01
SSH3-206ENST00000529224 CYP46A1Q9Y6A2 500 aa15□□□□□ -0.01
SSH3-206ENST00000529224 HAS3O00219 553 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 FOSP01100 380 aaPredicted RBP14.99□□□□□ -0.01
SSH3-206ENST00000529224 GDF6Q6KF10 455 aaPredicted RBP14.99□□□□□ -0.01
SSH3-206ENST00000529224 TYW1BQ6NUM6 668 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 CYFIP1Q7L576 1253 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 CCDC155Q8N6L0 562 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 RETREG2Q8NC44 543 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 GIMAP8Q8ND71 665 aaPredicted RBP14.99□□□□□ -0.01
SSH3-206ENST00000529224 HERVK_113Q902F9 699 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 TIFAQ96CG3 184 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 ALG1Q9BT22 464 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 PBX4Q9BYU1 374 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 TM6SF1Q9BZW5 370 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 ZSWIM6Q9HCJ5 1215 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 GTF2IRD1Q9UHL9 959 aa14.99□□□□□ -0.01
SSH3-206ENST00000529224 SMCO2A6NFE2 343 aa14.98□□□□□ -0.01
SSH3-206ENST00000529224 FGBP02675 491 aa14.98□□□□□ -0.01
SSH3-206ENST00000529224 PFKMP08237 780 aa14.98□□□□□ -0.01
SSH3-206ENST00000529224 SCG2P13521 617 aa14.98□□□□□ -0.01
SSH3-206ENST00000529224 RFC2P35250 354 aa14.98□□□□□ -0.01
SSH3-206ENST00000529224 EVCP57679 992 aa14.98□□□□□ -0.01
SSH3-206ENST00000529224 AKAP17AQ02040 695 aaKnown RBP14.98□□□□□ -0.01
SSH3-206ENST00000529224 PFKFB3Q16875 520 aaPredicted RBP14.98□□□□□ -0.01
SSH3-206ENST00000529224 CAGE1Q8TC20 777 aa14.98□□□□□ -0.01
SSH3-206ENST00000529224 SCLYQ96I15 445 aa14.98□□□□□ -0.01
SSH3-206ENST00000529224 ZNF576Q9H609 170 aa14.98□□□□□ -0.01
SSH3-206ENST00000529224 HDAC6Q9UBN7 1215 aa14.98□□□□□ -0.01
SSH3-206ENST00000529224 GTF3C3Q9Y5Q9 886 aa14.98□□□□□ -0.01
SSH3-206ENST00000529224 UBIAD1Q9Y5Z9 338 aa14.98□□□□□ -0.01
SSH3-206ENST00000529224 MAFGO15525 162 aa14.97□□□□□ -0.01
SSH3-206ENST00000529224 PRPF3O43395 683 aaKnown RBP14.97□□□□□ -0.01
SSH3-206ENST00000529224 LGALS2P05162 132 aa14.97□□□□□ -0.01
SSH3-206ENST00000529224 AP3B2Q13367 1082 aa14.97□□□□□ -0.01
SSH3-206ENST00000529224 MTMR1Q13613 665 aa14.97□□□□□ -0.01
SSH3-206ENST00000529224 OTOP2Q7RTS6 562 aa14.97□□□□□ -0.01
SSH3-206ENST00000529224 CCDC12Q8WUD4 166 aaPredicted RBP14.97□□□□□ -0.01
SSH3-206ENST00000529224 GPR20Q99678 358 aa14.97□□□□□ -0.01
SSH3-206ENST00000529224 C16orf70Q9BSU1 422 aa14.97□□□□□ -0.01
SSH3-206ENST00000529224 BCAS3Q9H6U6 928 aa14.97□□□□□ -0.01
SSH3-206ENST00000529224 JADE2Q9NQC1 790 aa14.97□□□□□ -0.01
SSH3-206ENST00000529224 CHD7Q9P2D1 2997 aa14.97□□□□□ -0.01
SSH3-206ENST00000529224 EVPLQ92817 2033 aa14.97□□□□□ -0.01
SSH3-206ENST00000529224 LOXHD1Q8IVV2 1947 aa14.96□□□□□ -0.01
SSH3-206ENST00000529224 ESYT2A0FGR8 921 aa14.96□□□□□ -0.01
SSH3-206ENST00000529224 H3BRB1 525 aa14.96□□□□□ -0.01
SSH3-206ENST00000529224 EIF5BO60841 1220 aaKnown RBP14.96□□□□□ -0.01
SSH3-206ENST00000529224 IQCF3P0C7M6 154 aa14.96□□□□□ -0.01
SSH3-206ENST00000529224 KCNA2P16389 499 aa14.96□□□□□ -0.01
SSH3-206ENST00000529224 ITGB5P18084 799 aa14.96□□□□□ -0.01
SSH3-206ENST00000529224 PDIA3P30101 505 aaKnown RBP14.96□□□□□ -0.01
SSH3-206ENST00000529224 TOB2Q14106 344 aaPredicted RBP14.96□□□□□ -0.01
SSH3-206ENST00000529224 MICAL3Q7RTP6 2002 aa14.96□□□□□ -0.01
SSH3-206ENST00000529224 AFAP1L1Q8TED9 768 aa14.96□□□□□ -0.01
SSH3-206ENST00000529224 CTAGE1Q96RT6 745 aa14.96□□□□□ -0.01
SSH3-206ENST00000529224 ANO3Q9BYT9 981 aa14.96□□□□□ -0.01
SSH3-206ENST00000529224 TUT1Q9H6E5 874 aaKnown RBP14.96□□□□□ -0.01
SSH3-206ENST00000529224 PARNO95453 639 aaKnown RBP14.95□□□□□ -0.02
SSH3-206ENST00000529224 IFNAR1P17181 557 aa14.95□□□□□ -0.02
SSH3-206ENST00000529224 CLK2P49760 499 aaKnown RBP14.95□□□□□ -0.02
SSH3-206ENST00000529224 CCT2P78371 535 aaKnown RBP14.95□□□□□ -0.02
SSH3-206ENST00000529224 SP4Q02446 784 aa14.95□□□□□ -0.02
SSH3-206ENST00000529224 RBL2Q08999 1139 aa14.95□□□□□ -0.02
SSH3-206ENST00000529224 PTK7Q13308 1070 aa14.95□□□□□ -0.02
SSH3-206ENST00000529224 NTRK3Q16288 839 aa14.95□□□□□ -0.02
SSH3-206ENST00000529224 PKN1Q16512 942 aa14.95□□□□□ -0.02
SSH3-206ENST00000529224 MCTP2Q6DN12 878 aa14.95□□□□□ -0.02
SSH3-206ENST00000529224 DEFB128Q7Z7B8 93 aa14.95□□□□□ -0.02
SSH3-206ENST00000529224 USP38Q8NB14 1042 aa14.95□□□□□ -0.02
SSH3-206ENST00000529224 PHKBQ93100 1093 aa14.95□□□□□ -0.02
SSH3-206ENST00000529224 ZNF274Q96GC6 653 aaPredicted RBP14.95□□□□□ -0.02
SSH3-206ENST00000529224 MXRA8Q9BRK3 442 aa14.95□□□□□ -0.02
SSH3-206ENST00000529224 RNF26Q9BY78 433 aaPredicted RBP14.95□□□□□ -0.02
SSH3-206ENST00000529224 UPF3BQ9BZI7 483 aaKnown RBP14.95□□□□□ -0.02
SSH3-206ENST00000529224 ZMYND12Q9H0C1 365 aa14.95□□□□□ -0.02
SSH3-206ENST00000529224 ZNF215Q9UL58 517 aaPredicted RBP14.95□□□□□ -0.02
SSH3-206ENST00000529224 YBX2Q9Y2T7 364 aaKnown RBP14.95□□□□□ -0.02
SSH3-206ENST00000529224 PTPRSQ13332 1948 aa14.94□□□□□ -0.02
SSH3-206ENST00000529224 ATP9AO75110 1047 aa14.94□□□□□ -0.02
SSH3-206ENST00000529224 ACTN1P12814 892 aa14.94□□□□□ -0.02
SSH3-206ENST00000529224 SELPP16109 830 aa14.94□□□□□ -0.02
SSH3-206ENST00000529224 GNA11P29992 359 aa14.94□□□□□ -0.02
SSH3-206ENST00000529224 SREBF1P36956 1147 aa14.94□□□□□ -0.02
SSH3-206ENST00000529224 DHX38Q92620 1227 aaKnown RBP14.94□□□□□ -0.02
SSH3-206ENST00000529224 PGBD1Q96JS3 809 aa14.94□□□□□ -0.02
SSH3-206ENST00000529224 SLC26A6Q9BXS9 759 aa14.94□□□□□ -0.02
SSH3-206ENST00000529224 NKX2-4Q9H2Z4 354 aa14.94□□□□□ -0.02
SSH3-206ENST00000529224 PRDM12Q9H4Q4 367 aa14.94□□□□□ -0.02
SSH3-206ENST00000529224 NCOA5Q9HCD5 579 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms