RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 NLRP5P59047 1200 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 PTPN11Q06124 597 aaPredicted RBP19.22■□□□□ 0.67
HIF3A-211ENST00000528563 PPP1R13LQ8WUF5 828 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 C16orf70Q9BSU1 422 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 LIMCH1Q9UPQ0 1083 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 TELO2Q9Y4R8 837 aa19.22■□□□□ 0.67
HIF3A-211ENST00000528563 STK36Q9NRP7 1315 aa19.21■□□□□ 0.67
HIF3A-211ENST00000528563 F2P00734 622 aa19.21■□□□□ 0.67
HIF3A-211ENST00000528563 FDPSP14324 419 aaKnown RBP19.21■□□□□ 0.67
HIF3A-211ENST00000528563 NPY5RQ15761 445 aa19.21■□□□□ 0.67
HIF3A-211ENST00000528563 NIPA1Q7RTP0 329 aa19.21■□□□□ 0.67
HIF3A-211ENST00000528563 SESTD1Q86VW0 696 aa19.21■□□□□ 0.67
HIF3A-211ENST00000528563 RASGRP4Q8TDF6 673 aa19.21■□□□□ 0.67
HIF3A-211ENST00000528563 GPR20Q99678 358 aa19.21■□□□□ 0.67
HIF3A-211ENST00000528563 TRMT13Q9NUP7 481 aaKnown RBP19.21■□□□□ 0.67
HIF3A-211ENST00000528563 PCDHA4Q9UN74 947 aa19.21■□□□□ 0.67
HIF3A-211ENST00000528563 GTF3C3Q9Y5Q9 886 aa19.21■□□□□ 0.67
HIF3A-211ENST00000528563 M0R2N6 131 aa19.2■□□□□ 0.66
HIF3A-211ENST00000528563 SUPT20HL2P0C7V6 817 aa19.2■□□□□ 0.66
HIF3A-211ENST00000528563 ZNF286BP0CG31 522 aa19.2■□□□□ 0.66
HIF3A-211ENST00000528563 ARP10275 920 aa19.2■□□□□ 0.66
HIF3A-211ENST00000528563 PSEN2P49810 448 aa19.2■□□□□ 0.66
HIF3A-211ENST00000528563 GALNT17Q6IS24 598 aa19.2■□□□□ 0.66
HIF3A-211ENST00000528563 LTBP2Q14767 1821 aa19.2■□□□□ 0.66
HIF3A-211ENST00000528563 FAM86B1E9PN63 330 aa19.19■□□□□ 0.66
HIF3A-211ENST00000528563 NOP56O00567 594 aaKnown RBP19.19■□□□□ 0.66
HIF3A-211ENST00000528563 EDIL3O43854 480 aa19.19■□□□□ 0.66
HIF3A-211ENST00000528563 FAM86B2P0C5J1 330 aa19.19■□□□□ 0.66
HIF3A-211ENST00000528563 CHMP4BP1P59074 171 aa19.19■□□□□ 0.66
HIF3A-211ENST00000528563 MFSD10Q14728 455 aa19.19■□□□□ 0.66
HIF3A-211ENST00000528563 FAM47CQ5HY64 1035 aa19.19■□□□□ 0.66
HIF3A-211ENST00000528563 BLIDQ8IZY5 108 aa19.19■□□□□ 0.66
HIF3A-211ENST00000528563 DAGLBQ8NCG7 672 aa19.19■□□□□ 0.66
HIF3A-211ENST00000528563 NSUN7Q8NE18 718 aaKnown RBP19.19■□□□□ 0.66
HIF3A-211ENST00000528563 ORC3Q9UBD5 711 aaPredicted RBP19.19■□□□□ 0.66
HIF3A-211ENST00000528563 IGLV3-22A0A075B6J6 115 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 H3BRB1 525 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 LGALS2P05162 132 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 CIITAP33076 1130 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 ZNF76P36508 570 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 ST3GAL1Q11201 340 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 KIAA0753Q2KHM9 967 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 MFSD5Q6N075 450 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 PHF20Q9BVI0 1012 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 NOC4LQ9BVI4 516 aaKnown RBP19.18■□□□□ 0.66
HIF3A-211ENST00000528563 KATNAL1Q9BW62 490 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 TUT1Q9H6E5 874 aaKnown RBP19.18■□□□□ 0.66
HIF3A-211ENST00000528563 AGO4Q9HCK5 861 aaKnown RBP19.18■□□□□ 0.66
HIF3A-211ENST00000528563 PKD2L1Q9P0L9 805 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 HDAC6Q9UBN7 1215 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 DOCK5Q9H7D0 1870 aa19.18■□□□□ 0.66
HIF3A-211ENST00000528563 GSTTP1A0A1W2PQM5 241 aa19.17■□□□□ 0.66
HIF3A-211ENST00000528563 CYP2C18P33260 490 aa19.17■□□□□ 0.66
HIF3A-211ENST00000528563 USP11P51784 963 aa19.17■□□□□ 0.66
HIF3A-211ENST00000528563 TDHQ8IZJ6 230 aa19.17■□□□□ 0.66
HIF3A-211ENST00000528563 CTAGE1Q96RT6 745 aa19.17■□□□□ 0.66
HIF3A-211ENST00000528563 ALG1Q9BT22 464 aa19.17■□□□□ 0.66
HIF3A-211ENST00000528563 HIPK3Q9H422 1215 aa19.17■□□□□ 0.66
HIF3A-211ENST00000528563 UPF2Q9HAU5 1272 aaKnown RBP19.17■□□□□ 0.66
HIF3A-211ENST00000528563 GJB4Q9NTQ9 266 aa19.17■□□□□ 0.66
HIF3A-211ENST00000528563 KCNJ14Q9UNX9 436 aa19.17■□□□□ 0.66
HIF3A-211ENST00000528563 NFASCO94856 1347 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 CYP2C9P11712 490 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 EPHB4P54760 987 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 SP4Q02446 784 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 FPGSQ05932 587 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 ITGB3BPQ13352 177 aaPredicted RBP19.16■□□□□ 0.66
HIF3A-211ENST00000528563 RABEP1Q15276 862 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 GDF6Q6KF10 455 aaPredicted RBP19.16■□□□□ 0.66
HIF3A-211ENST00000528563 PLA2G4DQ86XP0 818 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 C7orf31Q8N865 590 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 SEPT1Q8WYJ6 367 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 WASF1Q92558 559 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 ZSCAN31Q96LW9 406 aaPredicted RBP19.16■□□□□ 0.66
HIF3A-211ENST00000528563 PPP1R12CQ9BZL4 782 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 GTF2IRD1Q9UHL9 959 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 UMODL1Q5DID0 1318 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 XBP1P17861 261 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 PTGISQ16647 500 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 IL27Q8NEV9 243 aa19.16■□□□□ 0.66
HIF3A-211ENST00000528563 DHX15O43143 795 aaKnown RBP19.15■□□□□ 0.66
HIF3A-211ENST00000528563 JAK2O60674 1132 aa19.15■□□□□ 0.66
HIF3A-211ENST00000528563 TCF7P36402 384 aaPredicted RBP19.15■□□□□ 0.66
HIF3A-211ENST00000528563 FXR1P51114 621 aaKnown RBP eCLIP19.15■□□□□ 0.66
HIF3A-211ENST00000528563 SHHQ15465 462 aa19.15■□□□□ 0.66
HIF3A-211ENST00000528563 C16orf59Q7L2K0 433 aa19.15■□□□□ 0.66
HIF3A-211ENST00000528563 TMEM199Q8N511 208 aa19.15■□□□□ 0.66
HIF3A-211ENST00000528563 TBC1D32Q96NH3 1257 aa19.15■□□□□ 0.66
HIF3A-211ENST00000528563 SDF4Q9BRK5 362 aa19.15■□□□□ 0.66
HIF3A-211ENST00000528563 JPH1Q9HDC5 661 aaPredicted RBP19.15■□□□□ 0.66
HIF3A-211ENST00000528563 SLC9A2Q9UBY0 812 aa19.15■□□□□ 0.66
HIF3A-211ENST00000528563 CSF2RAP15509 400 aa19.14■□□□□ 0.65
HIF3A-211ENST00000528563 HIC1Q14526 733 aa19.14■□□□□ 0.65
HIF3A-211ENST00000528563 C9orf50Q5SZB4 431 aa19.14■□□□□ 0.65
HIF3A-211ENST00000528563 UTP14CQ5TAP6 766 aaKnown RBP19.14■□□□□ 0.65
HIF3A-211ENST00000528563 TRIM50Q86XT4 487 aa19.14■□□□□ 0.65
HIF3A-211ENST00000528563 TBCKQ8TEA7 893 aa19.14■□□□□ 0.65
HIF3A-211ENST00000528563 LENG9Q96B70 501 aa19.14■□□□□ 0.65
HIF3A-211ENST00000528563 WNT8AQ9H1J5 351 aa19.14■□□□□ 0.65
HIF3A-211ENST00000528563 SH2B1Q9NRF2 756 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms