RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 C7orf31Q8N865 590 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 PHKBQ93100 1093 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 GPR20Q99678 358 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 MXRA8Q9BRK3 442 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 SLC26A6Q9BXS9 759 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 ANO3Q9BYT9 981 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 BCAS3Q9H6U6 928 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 NCOA5Q9HCD5 579 aaKnown RBP13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 SH3GLB2Q9NR46 395 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 HDAC6Q9UBN7 1215 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 GTF2IRD1Q9UHL9 959 aa13.85□□□□□ -0.19
TRAPPC4-209ENST00000528230 H3BRB1 525 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 CPLX1O14810 134 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 SORBS3O60504 671 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 ATP9AO75110 1047 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 ZNF286BP0CG31 522 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 CYP2C9P11712 490 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 KCNA2P16389 499 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 SSRP1Q08945 709 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 ANKRD1Q15327 319 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 FAM109BQ6ICB4 259 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 GDF6Q6KF10 455 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 PSRC1Q6PGN9 363 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 NIPA1Q7RTP0 329 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 FAM177A1Q8N128 213 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 CCDC155Q8N6L0 562 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 RETREG2Q8NC44 543 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 CCDC148Q8NFR7 591 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 CAGE1Q8TC20 777 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 BICD2Q8TD16 824 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 RNPC3Q96LT9 517 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.84□□□□□ -0.193e-6■■□□□ 14
TRAPPC4-209ENST00000528230 ALG1Q9BT22 464 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 WNT8AQ9H1J5 351 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 TUT1Q9H6E5 874 aaKnown RBP13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 NOD1Q9Y239 953 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 UMODL1Q5DID0 1318 aa13.84□□□□□ -0.19
TRAPPC4-209ENST00000528230 MEIS1O00470 390 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 FGBP02675 491 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 LGALS2P05162 132 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 PFKMP08237 780 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 CYP3A4P08684 503 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 RFC2P35250 354 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 CCL23P55773 120 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 SMAD3P84022 425 aaKnown RBP13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 CEP55Q53EZ4 464 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 RASIP1Q5U651 963 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 ZNF365Q70YC5 407 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 REXO1Q8N1G1 1221 aaKnown RBP13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 CRYGNQ8WXF5 182 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 SEPT1Q8WYJ6 367 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 CTAGE1Q96RT6 745 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 KCNH7Q9NS40 1196 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 TMEM260Q9NX78 707 aa13.83□□□□□ -0.2
TRAPPC4-209ENST00000528230 SCN5AQ14524 2016 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 DEXIO95424 95 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 PARNO95453 639 aaKnown RBP13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 IQCF3P0C7M6 154 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 ACRP10323 421 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 ARHGAP4P98171 946 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 RBL2Q08999 1139 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 PTK7Q13308 1070 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 JAKMIP3Q5VZ66 844 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 AFAP1L1Q8TED9 768 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 PPP1R13LQ8WUF5 828 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 HERVK_113Q902F9 699 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 PGBD1Q96JS3 809 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 LARP6Q9BRS8 491 aaKnown RBP13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 SLKQ9H2G2 1235 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 MTIF3Q9H2K0 278 aaKnown RBP13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 ZNF215Q9UL58 517 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 NFASCO94856 1347 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 TANC1Q9C0D5 1861 aa13.82□□□□□ -0.2
TRAPPC4-209ENST00000528230 GSTTP1A0A1W2PQM5 241 aa13.81□□□□□ -0.2
TRAPPC4-209ENST00000528230 PFKFB2O60825 505 aa13.81□□□□□ -0.2
TRAPPC4-209ENST00000528230 CDKL5O76039 1030 aa13.81□□□□□ -0.2
TRAPPC4-209ENST00000528230 SEC24BO95487 1268 aa13.81□□□□□ -0.2
TRAPPC4-209ENST00000528230 HOXC8P31273 242 aa13.81□□□□□ -0.2
TRAPPC4-209ENST00000528230 ZNF76P36508 570 aa13.81□□□□□ -0.2
TRAPPC4-209ENST00000528230 STK3Q13188 491 aa13.81□□□□□ -0.2
TRAPPC4-209ENST00000528230 CYP2W1Q8TAV3 490 aa13.81□□□□□ -0.2
TRAPPC4-209ENST00000528230 SCLYQ96I15 445 aa13.81□□□□□ -0.2
TRAPPC4-209ENST00000528230 VPS54Q9P1Q0 977 aa13.81□□□□□ -0.2
TRAPPC4-209ENST00000528230 TPCN1Q9ULQ1 816 aa13.81□□□□□ -0.2
TRAPPC4-209ENST00000528230 C17orf102A2RUQ5 167 aa13.8□□□□□ -0.2
TRAPPC4-209ENST00000528230 ARP10275 920 aa13.8□□□□□ -0.2
TRAPPC4-209ENST00000528230 GNAT1P11488 350 aa13.8□□□□□ -0.2
TRAPPC4-209ENST00000528230 TCF7P36402 384 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC4-209ENST00000528230 AK2P54819 239 aa13.8□□□□□ -0.2
TRAPPC4-209ENST00000528230 NLRP5P59047 1200 aa13.8□□□□□ -0.2
TRAPPC4-209ENST00000528230 SCRN1Q12765 414 aa13.8□□□□□ -0.2
TRAPPC4-209ENST00000528230 UTP14CQ5TAP6 766 aaKnown RBP13.8□□□□□ -0.2
TRAPPC4-209ENST00000528230 GALNT17Q6IS24 598 aa13.8□□□□□ -0.2
TRAPPC4-209ENST00000528230 DEFB123Q8N688 67 aa13.8□□□□□ -0.2
TRAPPC4-209ENST00000528230 VWCEQ96DN2 955 aa13.8□□□□□ -0.2
TRAPPC4-209ENST00000528230 SDF4Q9BRK5 362 aa13.8□□□□□ -0.2
TRAPPC4-209ENST00000528230 C22orf23Q9BZE7 217 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms