RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 MAGOHP61326 146 aaKnown RBP16.09■□□□□ 0.17
CAPN1-214ENST00000528165 ARID5AQ03989 594 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 BYSLQ13895 437 aaKnown RBP16.09■□□□□ 0.17
CAPN1-214ENST00000528165 RCSD1Q6JBY9 416 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 DYMQ7RTS9 669 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 ANKS1AQ92625 1134 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 MAGOHBQ96A72 148 aaKnown RBP16.09■□□□□ 0.17
CAPN1-214ENST00000528165 KDM4CQ9H3R0 1056 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 PRDM11Q9NQV5 511 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 ZBTB1Q9Y2K1 713 aa16.09■□□□□ 0.17
CAPN1-214ENST00000528165 CICQ96RK0 1608 aaPredicted RBP16.08■□□□□ 0.17
CAPN1-214ENST00000528165 PVALEFA0A1B0GWK0 134 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 CEP104O60308 925 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 DNAJC8O75937 253 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-214ENST00000528165 GYG1P46976 350 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 GNAQP50148 359 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 RAPGEF1Q13905 1077 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 ENOX2Q16206 610 aaKnown RBP16.08■□□□□ 0.16
CAPN1-214ENST00000528165 CCDC152Q4G0S7 254 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 ZNF34Q8IZ26 560 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 PNMA1Q8ND90 353 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 CCT6BQ92526 530 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 PBKQ96KB5 322 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 LSM14BQ9BX40 385 aaKnown RBP16.08■□□□□ 0.16
CAPN1-214ENST00000528165 PACSIN1Q9BY11 444 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 ADAMTS1Q9UHI8 967 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 MYH1P12882 1939 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 RREB1Q92766 1687 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 A0A087X0T9 212 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 MYMKA6NI61 221 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 ERVV-1B6SEH8 477 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 OPLAHO14841 1288 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 MGRN1O60291 552 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 FAM228BP0C875 321 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 GHRP10912 638 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 GBP2P32456 591 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-214ENST00000528165 KRT71Q3SY84 523 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 TMED8Q6PL24 325 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-214ENST00000528165 BARHL2Q9NY43 387 aa16.08■□□□□ 0.16
CAPN1-214ENST00000528165 SART1O43290 800 aaKnown RBP16.07■□□□□ 0.16
CAPN1-214ENST00000528165 KLHL30Q0D2K2 578 aa16.07■□□□□ 0.16
CAPN1-214ENST00000528165 SCFD2Q8WU76 684 aa16.07■□□□□ 0.16
CAPN1-214ENST00000528165 AP1M1Q9BXS5 423 aa16.07■□□□□ 0.16
CAPN1-214ENST00000528165 NEUROG2Q9H2A3 272 aa16.07■□□□□ 0.16
CAPN1-214ENST00000528165 STXBP3O00186 592 aa16.07■□□□□ 0.16
CAPN1-214ENST00000528165 NOL4O94818 638 aa16.07■□□□□ 0.16
CAPN1-214ENST00000528165 KIF4AO95239 1232 aa16.07■□□□□ 0.16
CAPN1-214ENST00000528165 CYP19A1P11511 503 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-214ENST00000528165 NONOQ15233 471 aaKnown RBP eCLIP16.07■□□□□ 0.16
CAPN1-214ENST00000528165 CDK5RAP3Q96JB5 506 aa16.07■□□□□ 0.16
CAPN1-214ENST00000528165 MMTAG2Q9BU76 263 aaKnown RBP16.07■□□□□ 0.16
CAPN1-214ENST00000528165 NEBLO76041 1014 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 CYP2D6P10635 497 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 KRT25Q7Z3Z0 450 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 FMNL3Q8IVF7 1028 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 ACTRT1Q8TDG2 376 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 CHMP6Q96FZ7 201 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 CALR3Q96L12 384 aaKnown RBP16.06■□□□□ 0.16
CAPN1-214ENST00000528165 PSMD1Q99460 953 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 CRNKL1Q9BZJ0 848 aaKnown RBP16.06■□□□□ 0.16
CAPN1-214ENST00000528165 CNOT10Q9H9A5 744 aaKnown RBP16.06■□□□□ 0.16
CAPN1-214ENST00000528165 DCP1AQ9NPI6 582 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-214ENST00000528165 RIC8AQ9NPQ8 531 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 COL4A3BPQ9Y5P4 624 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 CASZ1Q86V15 1759 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 ZNF804BA4D1E1 1349 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 CCDC189A1A4V9 331 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 FRMD3A2A2Y4 597 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 DCDC2CA8MYV0 355 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 PGRMC1O00264 195 aaKnown RBP16.06■□□□□ 0.16
CAPN1-214ENST00000528165 DRD4P21917 467 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 PAX7P23759 505 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 USP11P51784 963 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 SUSD4Q5VX71 490 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 PROM2Q8N271 834 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 PROCA1Q8NCQ7 364 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-214ENST00000528165 DDX47Q9H0S4 455 aaKnown RBP16.06■□□□□ 0.16
CAPN1-214ENST00000528165 STK17AQ9UEE5 414 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 BAIAP2L1Q9UHR4 511 aa16.06■□□□□ 0.16
CAPN1-214ENST00000528165 ATP6V1G2O95670 118 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 RPSAP08865 295 aaKnown RBP16.05■□□□□ 0.16
CAPN1-214ENST00000528165 FLT3P36888 993 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 ELF3P78545 371 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-214ENST00000528165 GRM4Q14833 912 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 NAA25Q14CX7 972 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 LRRC41Q15345 812 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 PPP1R7Q15435 360 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 HIBCHQ6NVY1 386 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-214ENST00000528165 TLDC1Q6P9B6 456 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 ANKS4BQ8N8V4 417 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 FAM133AQ8N9E0 248 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 CCDC197Q8NCU1 140 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 LARP4BQ92615 738 aaKnown RBP16.05■□□□□ 0.16
CAPN1-214ENST00000528165 RSRC1Q96IZ7 334 aaKnown RBP16.05■□□□□ 0.16
CAPN1-214ENST00000528165 MTMR7Q9Y216 660 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 ZNF142P52746 1687 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-214ENST00000528165 A0A0G2JS52 829 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 KRIT1O00522 736 aa16.05■□□□□ 0.16
CAPN1-214ENST00000528165 DAPK3O43293 454 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms