RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 RIC8AQ9NPQ8 531 aa26.53■■□□□ 1.84
PKP3-206ENST00000528036 BRPF3Q9ULD4 1205 aa26.53■■□□□ 1.84
PKP3-206ENST00000528036 PCDHA6Q9UN73 950 aa26.53■■□□□ 1.84
PKP3-206ENST00000528036 PCDHA8Q9Y5H6 950 aa26.53■■□□□ 1.84
PKP3-206ENST00000528036 CNTNAP5Q8WYK1 1306 aa26.53■■□□□ 1.84
PKP3-206ENST00000528036 C17orf102A2RUQ5 167 aa26.52■■□□□ 1.84
PKP3-206ENST00000528036 KIF28PB7ZC32 967 aa26.52■■□□□ 1.84
PKP3-206ENST00000528036 CAND2O75155 1236 aa26.52■■□□□ 1.84
PKP3-206ENST00000528036 CKBP12277 381 aa26.52■■□□□ 1.84
PKP3-206ENST00000528036 PBX2P40425 430 aa26.52■■□□□ 1.84
PKP3-206ENST00000528036 NAPAP54920 295 aa26.52■■□□□ 1.84
PKP3-206ENST00000528036 SEMA3FQ13275 785 aa26.52■■□□□ 1.84
PKP3-206ENST00000528036 MCTP2Q6DN12 878 aa26.52■■□□□ 1.84
PKP3-206ENST00000528036 EMSYQ7Z589 1322 aa26.52■■□□□ 1.84
PKP3-206ENST00000528036 PPP1R13LQ8WUF5 828 aa26.52■■□□□ 1.84
PKP3-206ENST00000528036 ZFP91Q96JP5 570 aaPredicted RBP26.52■■□□□ 1.84
PKP3-206ENST00000528036 V9GY48 417 aaPredicted RBP26.52■■□□□ 1.84
PKP3-206ENST00000528036 CXCL10P02778 98 aa26.51■■□□□ 1.83
PKP3-206ENST00000528036 METAP2P50579 478 aaKnown RBP eCLIP26.51■■□□□ 1.839e-6■□□□□ 8.1
PKP3-206ENST00000528036 FUT2Q10981 343 aa26.51■■□□□ 1.83
PKP3-206ENST00000528036 TCEANC2Q96MN5 208 aa26.51■■□□□ 1.83
PKP3-206ENST00000528036 JAKMIP1Q96N16 626 aaKnown RBP26.51■■□□□ 1.83
PKP3-206ENST00000528036 BARHL2Q9NY43 387 aa26.51■■□□□ 1.83
PKP3-206ENST00000528036 UBIAD1Q9Y5Z9 338 aa26.51■■□□□ 1.83
PKP3-206ENST00000528036 hCG_1642624A0A1W2PR95 340 aa26.5■■□□□ 1.83
PKP3-206ENST00000528036 HOXC8P31273 242 aa26.5■■□□□ 1.83
PKP3-206ENST00000528036 KCNJ6P48051 423 aa26.5■■□□□ 1.83
PKP3-206ENST00000528036 ADCY7P51828 1080 aa26.5■■□□□ 1.83
PKP3-206ENST00000528036 AP3B2Q13367 1082 aa26.5■■□□□ 1.83
PKP3-206ENST00000528036 MTMR1Q13613 665 aa26.5■■□□□ 1.83
PKP3-206ENST00000528036 ERICH6BQ5W0A0 696 aa26.5■■□□□ 1.83
PKP3-206ENST00000528036 WWC2Q6AWC2 1192 aa26.5■■□□□ 1.83
PKP3-206ENST00000528036 CNKSR3Q6P9H4 555 aa26.5■■□□□ 1.83
PKP3-206ENST00000528036 SERINC5Q86VE9 423 aa26.5■■□□□ 1.83
PKP3-206ENST00000528036 CCDC12Q8WUD4 166 aaPredicted RBP26.5■■□□□ 1.83
PKP3-206ENST00000528036 DHX38Q92620 1227 aaKnown RBP26.5■■□□□ 1.83
PKP3-206ENST00000528036 JADE2Q9NQC1 790 aa26.5■■□□□ 1.83
PKP3-206ENST00000528036 ABHD14A-ACY1A0A1B0GW23 586 aa26.49■■□□□ 1.83
PKP3-206ENST00000528036 SORBS3O60504 671 aa26.49■■□□□ 1.83
PKP3-206ENST00000528036 SEPT1Q8WYJ6 367 aa26.49■■□□□ 1.83
PKP3-206ENST00000528036 TNPO1Q92973 898 aaKnown RBP26.49■■□□□ 1.83
PKP3-206ENST00000528036 ATP6V0A1Q93050 837 aa26.49■■□□□ 1.83
PKP3-206ENST00000528036 NAP1L2Q9ULW6 460 aaPredicted RBP26.49■■□□□ 1.83
PKP3-206ENST00000528036 SNX14Q9Y5W7 946 aa26.49■■□□□ 1.83
PKP3-206ENST00000528036 COL6A3P12111 3177 aa26.49■■□□□ 1.83
PKP3-206ENST00000528036 SMIM10L2AP0DMW4 78 aa26.48■■□□□ 1.83
PKP3-206ENST00000528036 SMIM10L2BP0DMW5 78 aa26.48■■□□□ 1.83
PKP3-206ENST00000528036 ITGB5P18084 799 aa26.48■■□□□ 1.83
PKP3-206ENST00000528036 UBE2SQ16763 222 aa26.48■■□□□ 1.83
PKP3-206ENST00000528036 TRIM71Q2Q1W2 868 aaKnown RBP26.48■■□□□ 1.83
PKP3-206ENST00000528036 Q6ZUG5 572 aa26.48■■□□□ 1.83
PKP3-206ENST00000528036 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.48■■□□□ 1.832e-8■■■■■ 56.1
PKP3-206ENST00000528036 NKX2-4Q9H2Z4 354 aa26.48■■□□□ 1.83
PKP3-206ENST00000528036 SMCO2A6NFE2 343 aa26.47■■□□□ 1.83
PKP3-206ENST00000528036 KCNA2P16389 499 aa26.47■■□□□ 1.83
PKP3-206ENST00000528036 AGXT2Q9BYV1 514 aa26.47■■□□□ 1.83
PKP3-206ENST00000528036 FAM217BQ9NTX9 383 aaPredicted RBP26.47■■□□□ 1.83
PKP3-206ENST00000528036 MYH7BA7E2Y1 1941 aa26.47■■□□□ 1.83
PKP3-206ENST00000528036 NID2Q14112 1375 aa26.46■■□□□ 1.83
PKP3-206ENST00000528036 NRCAMQ92823 1304 aa26.46■■□□□ 1.83
PKP3-206ENST00000528036 STXBP3O00186 592 aa26.46■■□□□ 1.83
PKP3-206ENST00000528036 RPS6KB1P23443 525 aa26.46■■□□□ 1.83
PKP3-206ENST00000528036 AKAP17AQ02040 695 aaKnown RBP26.46■■□□□ 1.83
PKP3-206ENST00000528036 IKBKEQ14164 716 aa26.46■■□□□ 1.83
PKP3-206ENST00000528036 PFKFB3Q16875 520 aaPredicted RBP26.46■■□□□ 1.83
PKP3-206ENST00000528036 PPP2R2DQ66LE6 453 aa26.46■■□□□ 1.83
PKP3-206ENST00000528036 BRF1Q92994 677 aa26.46■■□□□ 1.83
PKP3-206ENST00000528036 MXRA8Q9BRK3 442 aa26.46■■□□□ 1.83
PKP3-206ENST00000528036 RNPEPQ9H4A4 650 aa26.46■■□□□ 1.83
PKP3-206ENST00000528036 YBX2Q9Y2T7 364 aaKnown RBP26.46■■□□□ 1.83
PKP3-206ENST00000528036 RSPH10B2B2RC85 870 aa26.45■■□□□ 1.82
PKP3-206ENST00000528036 RPLP2P05387 115 aaKnown RBP26.45■■□□□ 1.82
PKP3-206ENST00000528036 RSPH10BP0C881 870 aa26.45■■□□□ 1.82
PKP3-206ENST00000528036 CDC27P30260 824 aa26.45■■□□□ 1.82
PKP3-206ENST00000528036 ZNF618Q5T7W0 954 aa26.45■■□□□ 1.82
PKP3-206ENST00000528036 HERC6Q8IVU3 1022 aa26.45■■□□□ 1.82
PKP3-206ENST00000528036 SMARCAD1Q9H4L7 1026 aa26.45■■□□□ 1.82
PKP3-206ENST00000528036 BCAS3Q9H6U6 928 aa26.45■■□□□ 1.82
PKP3-206ENST00000528036 ERAP1Q9NZ08 941 aa26.45■■□□□ 1.82
PKP3-206ENST00000528036 ESYT2A0FGR8 921 aa26.44■■□□□ 1.82
PKP3-206ENST00000528036 SCG2P13521 617 aa26.44■■□□□ 1.82
PKP3-206ENST00000528036 TCF7P36402 384 aaPredicted RBP26.44■■□□□ 1.82
PKP3-206ENST00000528036 THPOP40225 353 aa26.44■■□□□ 1.82
PKP3-206ENST00000528036 RABGGTBP53611 331 aa26.44■■□□□ 1.82
PKP3-206ENST00000528036 APOBRQ0VD83 1088 aa26.44■■□□□ 1.82
PKP3-206ENST00000528036 UTP14CQ5TAP6 766 aaKnown RBP26.44■■□□□ 1.82
PKP3-206ENST00000528036 NFASCO94856 1347 aa26.43■■□□□ 1.82
PKP3-206ENST00000528036 TANC1Q9C0D5 1861 aa26.43■■□□□ 1.82
PKP3-206ENST00000528036 DLL1O00548 723 aa26.43■■□□□ 1.82
PKP3-206ENST00000528036 PRPF3O43395 683 aaKnown RBP26.43■■□□□ 1.82
PKP3-206ENST00000528036 NBNO60934 754 aa26.43■■□□□ 1.82
PKP3-206ENST00000528036 ATP9AO75110 1047 aa26.43■■□□□ 1.82
PKP3-206ENST00000528036 LGR5O75473 907 aa26.43■■□□□ 1.82
PKP3-206ENST00000528036 GNA11P29992 359 aa26.43■■□□□ 1.82
PKP3-206ENST00000528036 ADD1P35611 737 aaKnown RBP26.43■■□□□ 1.82
PKP3-206ENST00000528036 ZNF200P98182 395 aaPredicted RBP26.43■■□□□ 1.82
PKP3-206ENST00000528036 GPNMBQ14956 572 aa26.43■■□□□ 1.82
PKP3-206ENST00000528036 CEP55Q53EZ4 464 aa26.43■■□□□ 1.82
PKP3-206ENST00000528036 TAF2Q6P1X5 1199 aa26.43■■□□□ 1.82
PKP3-206ENST00000528036 NIPA1Q7RTP0 329 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms