RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 SUGCTQ9HAC7 445 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 SH2B1Q9NRF2 756 aaPredicted RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 HOXC10Q9NYD6 342 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 SCHIP1Q9P0W5 487 aaPredicted RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 PRDM4Q9UKN5 801 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 USP3Q9Y6I4 520 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 MROH7-TTC4A0A0A0MT08 1334 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 SALL1Q9NSC2 1324 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 NAV1Q8NEY1 1877 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 MYADML2A6NDP7 307 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 GOLGA6L3A6NEY3 463 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 SFI1A8K8P3 1242 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 M0R2N6 131 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 GRM8O00222 908 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 OIP5O43482 229 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 NCK2O43639 380 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 ZEB2O60315 1214 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 CABYRO75952 493 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 BAIAP3O94812 1187 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 SLC25A27O95847 323 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 HLA-DOAP06340 250 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 SUPT20HL2P0C7V6 817 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 ZNF865P0CJ78 1059 aaPredicted RBP4.87□□□□□ -1.63
CHD7-205ENST00000527825 VCAM1P19320 739 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 MSX1P28360 303 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 RFC2P35250 354 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 MAP2K3P46734 347 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 PLA2G4AP47712 749 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 SEC13P55735 322 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 GSTO1P78417 241 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 DMWDQ09019 674 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 ITGA7Q13683 1181 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 AAMPQ13685 434 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 COG2Q14746 738 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 RAB3GAP1Q15042 981 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 SMAD2Q15796 467 aaKnown RBP4.87□□□□□ -1.63
CHD7-205ENST00000527825 LRRC24Q50LG9 513 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 C20orf194Q5TEA3 1177 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 G2E3Q7L622 706 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 SPRED2Q7Z698 418 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 SKAP1Q86WV1 359 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 TEX11Q8IYF3 940 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 ZNF295-AS1Q8N0V1 137 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 MB21D1Q8N884 522 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 C8orf58Q8NAV2 365 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 TSEN2Q8NCE0 465 aaKnown RBP4.87□□□□□ -1.63
CHD7-205ENST00000527825 LPIN2Q92539 896 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 MRPL38Q96DV4 380 aaKnown RBP4.87□□□□□ -1.63
CHD7-205ENST00000527825 CCDC97Q96F63 343 aaPredicted RBP4.87□□□□□ -1.63
CHD7-205ENST00000527825 TBC1D32Q96NH3 1257 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 NAP1L5Q96NT1 182 aaPredicted RBP4.87□□□□□ -1.63
CHD7-205ENST00000527825 OXCT2Q9BYC2 517 aaPredicted RBP4.87□□□□□ -1.63
CHD7-205ENST00000527825 TRPV6Q9H1D0 765 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 IFT57Q9NWB7 429 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 RALYQ9UKM9 306 aaKnown RBP4.87□□□□□ -1.63
CHD7-205ENST00000527825 DIS3Q9Y2L1 958 aaKnown RBP4.87□□□□□ -1.63
CHD7-205ENST00000527825 PKD1L2Q7Z442 2459 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 MICAL3Q7RTP6 2002 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 TET1Q8NFU7 2136 aa4.87□□□□□ -1.63
CHD7-205ENST00000527825 LCHNA4D1U4 455 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 USP17L12C9JPN9 530 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 USP17L21D6R901 530 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 MBTPS2O43462 519 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 B4GALT4O60513 344 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 GH2P01242 217 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 IGHA1P01876 353 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 PGK2P07205 417 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 SDHBP21912 280 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 MCM4P33991 863 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 DDIT3P35638 169 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 GJA9P57773 515 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 ERVK-21P61565 698 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 DPYDQ12882 1025 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 LBRQ14739 615 aaKnown RBP4.86□□□□□ -1.63
CHD7-205ENST00000527825 WDR43Q15061 677 aaKnown RBP eCLIP4.86□□□□□ -1.63
CHD7-205ENST00000527825 TCEAL5Q5H9L2 206 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 TBCELQ5QJ74 424 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 CCSAPQ6IQ19 270 aaPredicted RBP4.86□□□□□ -1.63
CHD7-205ENST00000527825 CXCL17Q6UXB2 119 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 RPAINQ86UA6 219 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 ANKMY2Q8IV38 441 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 FOXP4Q8IVH2 680 aaPredicted RBP4.86□□□□□ -1.63
CHD7-205ENST00000527825 PGBD3Q8N328 593 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 BEND7Q8N7W2 519 aaPredicted RBP4.86□□□□□ -1.63
CHD7-205ENST00000527825 RUNDC1Q96C34 613 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 DDX11Q96FC9 970 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 MAP7D2Q96T17 732 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 AP5M1Q9H0R1 490 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 NSUN3Q9H649 340 aaKnown RBP4.86□□□□□ -1.63
CHD7-205ENST00000527825 CABP5Q9NP86 173 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 TNKSO95271 1327 aa4.86□□□□□ -1.63
CHD7-205ENST00000527825 MYH7BA7E2Y1 1941 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 GPR75-ASB3A0A0A6YYF3 556 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 LINC01553A4QN01 128 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 CYP2C9P11712 490 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 FGFR2P21802 821 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 RHBDL3P58872 404 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 JAG1P78504 1218 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 BEX3Q00994 111 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 SMAD4Q13485 552 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms