RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 SLF1Q9BQI6 1058 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 FOXQ1Q9C009 403 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 HOMER2Q9NSB8 354 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 GTF2IRD1Q9UHL9 959 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 COG6Q9Y2V7 657 aa8.46□□□□□ -1.06
VPS26B-204ENST00000527586 CTDP1Q9Y5B0 961 aaPredicted RBP8.46□□□□□ -1.06
VPS26B-204ENST00000527586 J3QKU1 62 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 ZBED4O75132 1171 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 THPOP40225 353 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 USP5P45974 858 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 RFX5P48382 616 aaPredicted RBP8.45□□□□□ -1.06
VPS26B-204ENST00000527586 ERVFC1P60507 584 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 TIMM10P62072 90 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 DYNLL1P63167 89 aaKnown RBP8.45□□□□□ -1.06
VPS26B-204ENST00000527586 ICA1Q05084 483 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 CALD1Q05682 793 aaKnown RBP8.45□□□□□ -1.06
VPS26B-204ENST00000527586 ZNF252P-AS1Q0IIN9 211 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 TWISTNBQ3B726 338 aaPredicted RBP8.45□□□□□ -1.06
VPS26B-204ENST00000527586 TSSK4Q6SA08 328 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 RUFY4Q6ZNE9 571 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 C7orf31Q8N865 590 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 SPATA5Q8NB90 893 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 ACSF2Q96CM8 615 aaPredicted RBP8.45□□□□□ -1.06
VPS26B-204ENST00000527586 BCO2Q9BYV7 579 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 OSBPL7Q9BZF2 842 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 HDAC6Q9UBN7 1215 aa8.45□□□□□ -1.06
VPS26B-204ENST00000527586 GIPC1O14908 333 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 SEC24BO95487 1268 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 NTRK1P04629 796 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 NOVA1P51513 510 aaKnown RBP8.44□□□□□ -1.06
VPS26B-204ENST00000527586 ATAT1Q5SQI0 421 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 PROSER1Q86XN7 944 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 RASGRP4Q8TDF6 673 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 KAT2BQ92831 832 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 CASP10Q92851 521 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 COPS5Q92905 334 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 LRIG1Q96JA1 1093 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 SRCIN1Q9C0H9 1055 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 A1CFQ9NQ94 594 aaKnown RBP8.44□□□□□ -1.06
VPS26B-204ENST00000527586 ARHGEF3Q9NR81 526 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 ASXL3Q9C0F0 2248 aa8.44□□□□□ -1.06
VPS26B-204ENST00000527586 RBM47A0AV96 593 aaKnown RBP8.43□□□□□ -1.06
VPS26B-204ENST00000527586 FSCN2O14926 492 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 KALRNO60229 2985 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 UBE3AQ05086 875 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 PDE4BQ07343 736 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 TROAPQ12815 778 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 RARS2Q5T160 578 aaKnown RBP8.43□□□□□ -1.06
VPS26B-204ENST00000527586 STPG1Q5TH74 334 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 PLPP4Q5VZY2 271 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 KIAA1841Q6NSI8 718 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 CELF5Q8N6W0 485 aaKnown RBP8.43□□□□□ -1.06
VPS26B-204ENST00000527586 GPR152Q8TDT2 470 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 HNRNPLLQ8WVV9 542 aaKnown RBP8.43□□□□□ -1.06
VPS26B-204ENST00000527586 RSAD2Q8WXG1 361 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 TSR2Q969E8 191 aaKnown RBP8.43□□□□□ -1.06
VPS26B-204ENST00000527586 NUP88Q99567 741 aaPredicted RBP8.43□□□□□ -1.06
VPS26B-204ENST00000527586 MYL10Q9BUA6 226 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 CLMPQ9H6B4 373 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 ACAD9Q9H845 621 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 IGSF9Q9P2J2 1179 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 SRPK3Q9UPE1 567 aa8.43□□□□□ -1.06
VPS26B-204ENST00000527586 SPTAN1Q13813 2472 aaKnown RBP8.42□□□□□ -1.06
VPS26B-204ENST00000527586 NKRFO15226 690 aaKnown RBP eCLIP8.42□□□□□ -1.06
VPS26B-204ENST00000527586 DGKIO75912 1065 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 CIAO1O76071 339 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 POLR3DP05423 398 aaPredicted RBP8.42□□□□□ -1.06
VPS26B-204ENST00000527586 GABPAQ06546 454 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 MVPQ14764 893 aaKnown RBP8.42□□□□□ -1.06
VPS26B-204ENST00000527586 PPP2R5BQ15173 497 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 PDE12Q6L8Q7 609 aaKnown RBP8.42□□□□□ -1.06
VPS26B-204ENST00000527586 KANK3Q6NY19 840 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 DCLRE1AQ6PJP8 1040 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 OTOP3Q7RTS5 596 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 CMTR2Q8IYT2 770 aaKnown RBP8.42□□□□□ -1.06
VPS26B-204ENST00000527586 C12orf76Q8N812 135 aaPredicted RBP8.42□□□□□ -1.06
VPS26B-204ENST00000527586 PRPF38AQ8NAV1 312 aaKnown RBP8.42□□□□□ -1.06
VPS26B-204ENST00000527586 MORC4Q8TE76 937 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 APBB2Q92870 758 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 XAGE2Q96GT9 111 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 ALG1Q9BT22 464 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 GOPCQ9HD26 462 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 AAASQ9NRG9 546 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 PARP14Q460N5 1801 aa8.42□□□□□ -1.06
VPS26B-204ENST00000527586 IL16Q14005 1332 aa8.41□□□□□ -1.06
VPS26B-204ENST00000527586 SRFP11831 508 aa8.41□□□□□ -1.06
VPS26B-204ENST00000527586 EEF2P13639 858 aaKnown RBP8.41□□□□□ -1.06
VPS26B-204ENST00000527586 AKR1B1P15121 316 aa8.41□□□□□ -1.06
VPS26B-204ENST00000527586 EVX2Q03828 476 aa8.41□□□□□ -1.06
VPS26B-204ENST00000527586 APOBRQ0VD83 1088 aa8.41□□□□□ -1.06
VPS26B-204ENST00000527586 NONOQ15233 471 aaKnown RBP eCLIP8.41□□□□□ -1.06
VPS26B-204ENST00000527586 SF3A2Q15428 464 aaKnown RBP8.41□□□□□ -1.06
VPS26B-204ENST00000527586 PAN2Q504Q3 1202 aaKnown RBP8.41□□□□□ -1.06
VPS26B-204ENST00000527586 KIAA1211LQ6NV74 962 aa8.41□□□□□ -1.06
VPS26B-204ENST00000527586 C12orf50Q8NA57 414 aaPredicted RBP8.41□□□□□ -1.06
VPS26B-204ENST00000527586 SLC39A7Q92504 469 aa8.41□□□□□ -1.06
VPS26B-204ENST00000527586 KIFC2Q96AC6 838 aa8.41□□□□□ -1.06
VPS26B-204ENST00000527586 SLC38A10Q9HBR0 1119 aa8.41□□□□□ -1.06
VPS26B-204ENST00000527586 NEUROG3Q9Y4Z2 214 aa8.41□□□□□ -1.06
VPS26B-204ENST00000527586 CFAP46Q8IYW2 2715 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms