RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 CLK2P49760 499 aaKnown RBP14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 TOB1P50616 345 aaPredicted RBP14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 AP3B2Q13367 1082 aa14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 SF3A1Q15459 793 aaKnown RBP14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 UBE2SQ16763 222 aa14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 DUSP28Q4G0W2 176 aa14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 EARS2Q5JPH6 523 aaKnown RBP14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 TLK2Q86UE8 772 aa14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 DNERQ8NFT8 737 aa14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 LEO1Q8WVC0 666 aaPredicted RBP14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 GLT1D1Q96MS3 346 aa14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 PRDM5Q9NQX1 630 aaPredicted RBP14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 TMEM260Q9NX78 707 aa14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 CLIC4Q9Y696 253 aa14.4□□□□□ -0.1
SSSCA1-203ENST00000526877 GOLGA6L4A6NEF3 574 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 FAM205CA6NFA0 338 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 SPDYE3A6NKU9 549 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 OPLAHO14841 1288 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 PQBP1O60828 265 aaKnown RBP14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 CFBP00751 764 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 FSCN1Q16658 493 aaKnown RBP14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 INF2Q27J81 1249 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 TTC38Q5R3I4 469 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 USP17L6PQ6QN14 398 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 SLC43A3Q8NBI5 491 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 KCNG4Q8TDN1 519 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 SYTL5Q8TDW5 730 aaPredicted RBP14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 WDR11Q9BZH6 1224 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 EHMT1Q9H9B1 1298 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 LMBRD1Q9NUN5 540 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 MAP3K20Q9NYL2 800 aaKnown RBP14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 COL20A1Q9P218 1284 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 GRIN2DO15399 1336 aa14.39□□□□□ -0.11
SSSCA1-203ENST00000526877 ARVCFO00192 962 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 MEIS2O14770 477 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 SPTLC2O15270 562 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 GHRHRQ02643 423 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 SLC39A14Q15043 492 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 SHHQ15465 462 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 SKOR2Q2VWA4 1001 aaPredicted RBP14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 GPR153Q6NV75 609 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 CXCL17Q6UXB2 119 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 NEK8Q86SG6 692 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 LINC00301Q8NCQ3 95 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 TBCKQ8TEA7 893 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 TAAR1Q96RJ0 339 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 NAP1L4Q99733 375 aaKnown RBP14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 FTOQ9C0B1 505 aaKnown RBP eCLIP14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 AP5M1Q9H0R1 490 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 TBX21Q9UL17 535 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 MYH7BA7E2Y1 1941 aa14.38□□□□□ -0.11
SSSCA1-203ENST00000526877 A0A0U1RQG5 324 aaPredicted RBP14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 DCDC2CA8MYV0 355 aa14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 HOXA13P31271 388 aaPredicted RBP14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 EPHB4P54760 987 aa14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 UBE2HP62256 183 aa14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 PDE4DQ08499 809 aa14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 ORC2Q13416 577 aaPredicted RBP14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 ZNF174Q15697 407 aa14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 C9orf50Q5SZB4 431 aa14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 FAM126BQ8IXS8 530 aa14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 VTI1AQ96AJ9 217 aa14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 ANO3Q9BYT9 981 aa14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 TMEM39AQ9NV64 488 aa14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 PCDHB6Q9Y5E3 794 aa14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 KIAA1217Q5T5P2 1943 aa14.37□□□□□ -0.11
SSSCA1-203ENST00000526877 PPP6R2O75170 966 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 CABYRO75952 493 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 CD4P01730 458 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 RAG1P15918 1043 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 ME1P48163 572 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 HSD17B4P51659 736 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 NBR1Q14596 966 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 PTPAQ15257 358 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 LETM2Q2VYF4 491 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 CCDC62Q6P9F0 684 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 FCHSD1Q86WN1 690 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 PGBD1Q96JS3 809 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 MROH7Q68CQ1 1323 aa14.36□□□□□ -0.11
SSSCA1-203ENST00000526877 B4DLN1 442 aa14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 ZEB2O60315 1214 aa14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 CCNT1O60563 726 aaKnown RBP14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 ARIH2O95376 493 aa14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 MBD3O95983 291 aa14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 TIMP1P01033 207 aa14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 MCM7P33993 719 aa14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 USP11P51784 963 aa14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 ITGA7Q13683 1181 aa14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 NSUN6Q8TEA1 469 aaKnown RBP14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 SCFD2Q8WU76 684 aa14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 COPS5Q92905 334 aa14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 IWS1Q96ST2 819 aa14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 RMDN3Q96TC7 470 aa14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 MPHOSPH6Q99547 160 aaKnown RBP14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 MORC2Q9Y6X9 1032 aaPredicted RBP14.35□□□□□ -0.11
SSSCA1-203ENST00000526877 A6NJR5 290 aa14.34□□□□□ -0.11
SSSCA1-203ENST00000526877 LAD1O00515 517 aa14.34□□□□□ -0.11
SSSCA1-203ENST00000526877 NKRFO15226 690 aaKnown RBP eCLIP14.34□□□□□ -0.11
SSSCA1-203ENST00000526877 TRAK2O60296 914 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms