RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 ALG1Q9BT22 464 aa17.17■□□□□ 0.34
HIF3A-210ENST00000526506 BCAS3Q9H6U6 928 aa17.17■□□□□ 0.34
HIF3A-210ENST00000526506 SH2B1Q9NRF2 756 aaPredicted RBP17.17■□□□□ 0.34
HIF3A-210ENST00000526506 PKD2L1Q9P0L9 805 aa17.17■□□□□ 0.34
HIF3A-210ENST00000526506 COLQQ9Y215 455 aaPredicted RBP17.17■□□□□ 0.34
HIF3A-210ENST00000526506 MEIS1O00470 390 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 ATP9AO75110 1047 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 F2P00734 622 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 CD4P01730 458 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 ZNF286BP0CG31 522 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 RAG1P15918 1043 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 CHMP4BP1P59074 171 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 MDM2Q00987 491 aaPredicted RBP17.16■□□□□ 0.34
HIF3A-210ENST00000526506 ST3GAL1Q11201 340 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 KAT2BQ92831 832 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 GPR20Q99678 358 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 PHF20Q9BVI0 1012 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 KATNAL1Q9BW62 490 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 BACH2Q9BYV9 841 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 TBX21Q9UL17 535 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 KCNJ14Q9UNX9 436 aa17.16■□□□□ 0.34
HIF3A-210ENST00000526506 SCN10AQ9Y5Y9 1956 aa17.15■□□□□ 0.34
HIF3A-210ENST00000526506 FAM86B1E9PN63 330 aa17.15■□□□□ 0.34
HIF3A-210ENST00000526506 B4GALT4O60513 344 aa17.15■□□□□ 0.34
HIF3A-210ENST00000526506 JAK2O60674 1132 aa17.15■□□□□ 0.34
HIF3A-210ENST00000526506 FAM86B2P0C5J1 330 aa17.15■□□□□ 0.34
HIF3A-210ENST00000526506 SP4Q02446 784 aa17.15■□□□□ 0.34
HIF3A-210ENST00000526506 PTPN11Q06124 597 aaPredicted RBP17.15■□□□□ 0.34
HIF3A-210ENST00000526506 NPY5RQ15761 445 aa17.15■□□□□ 0.34
HIF3A-210ENST00000526506 CCDC83Q8IWF9 413 aa17.15■□□□□ 0.34
HIF3A-210ENST00000526506 TRPV6Q9H1D0 765 aa17.15■□□□□ 0.34
HIF3A-210ENST00000526506 PRO3102Q9H379 93 aa17.15■□□□□ 0.34
HIF3A-210ENST00000526506 M0R2N6 131 aa17.14■□□□□ 0.33
HIF3A-210ENST00000526506 LGALS2P05162 132 aa17.14■□□□□ 0.33
HIF3A-210ENST00000526506 SUPT20HL2P0C7V6 817 aa17.14■□□□□ 0.33
HIF3A-210ENST00000526506 ARP10275 920 aa17.14■□□□□ 0.33
HIF3A-210ENST00000526506 BMP8BP34820 402 aa17.14■□□□□ 0.33
HIF3A-210ENST00000526506 PSEN2P49810 448 aa17.14■□□□□ 0.33
HIF3A-210ENST00000526506 SETQ01105 290 aaPredicted RBP17.14■□□□□ 0.33
HIF3A-210ENST00000526506 MFSD10Q14728 455 aa17.14■□□□□ 0.33
HIF3A-210ENST00000526506 KRT25Q7Z3Z0 450 aa17.14■□□□□ 0.33
HIF3A-210ENST00000526506 PLA2G4DQ86XP0 818 aa17.14■□□□□ 0.33
HIF3A-210ENST00000526506 SDF4Q9BRK5 362 aa17.14■□□□□ 0.33
HIF3A-210ENST00000526506 LLPHQ9BRT6 129 aaKnown RBP17.14■□□□□ 0.33
HIF3A-210ENST00000526506 AGO4Q9HCK5 861 aaKnown RBP17.14■□□□□ 0.33
HIF3A-210ENST00000526506 JPH1Q9HDC5 661 aaPredicted RBP17.14■□□□□ 0.33
HIF3A-210ENST00000526506 GJB4Q9NTQ9 266 aa17.14■□□□□ 0.33
HIF3A-210ENST00000526506 DNAH12Q6ZR08 3092 aa17.14■□□□□ 0.33
HIF3A-210ENST00000526506 MYH7BA7E2Y1 1941 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 IGLV3-22A0A075B6J6 115 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 HAS3O00219 553 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 ITGB8P26012 769 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 CIITAP33076 1130 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 USP11P51784 963 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 KIAA0753Q2KHM9 967 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 SESTD1Q86VW0 696 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 C7orf31Q8N865 590 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 TBCKQ8TEA7 893 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 PPP1R13LQ8WUF5 828 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 BADQ92934 168 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 C16orf70Q9BSU1 422 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 TRMT13Q9NUP7 481 aaKnown RBP17.13■□□□□ 0.33
HIF3A-210ENST00000526506 SLC9A2Q9UBY0 812 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 TELO2Q9Y4R8 837 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 NFASCO94856 1347 aa17.13■□□□□ 0.33
HIF3A-210ENST00000526506 LTBP2Q14767 1821 aa17.12■□□□□ 0.33
HIF3A-210ENST00000526506 H3BRB1 525 aa17.12■□□□□ 0.33
HIF3A-210ENST00000526506 TIMP1P01033 207 aa17.12■□□□□ 0.33
HIF3A-210ENST00000526506 TCF7P36402 384 aaPredicted RBP17.12■□□□□ 0.33
HIF3A-210ENST00000526506 ITGB3BPQ13352 177 aaPredicted RBP17.12■□□□□ 0.33
HIF3A-210ENST00000526506 TRIM29Q14134 588 aa17.12■□□□□ 0.33
HIF3A-210ENST00000526506 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
HIF3A-210ENST00000526506 PRR16Q569H4 304 aa17.12■□□□□ 0.33
HIF3A-210ENST00000526506 SEPT1Q8WYJ6 367 aa17.12■□□□□ 0.33
HIF3A-210ENST00000526506 UBE2OQ9C0C9 1292 aaKnown RBP17.12■□□□□ 0.33
HIF3A-210ENST00000526506 HIPK3Q9H422 1215 aa17.12■□□□□ 0.33
HIF3A-210ENST00000526506 TUT1Q9H6E5 874 aaKnown RBP17.12■□□□□ 0.33
HIF3A-210ENST00000526506 BRMS1Q9HCU9 246 aa17.12■□□□□ 0.33
HIF3A-210ENST00000526506 ZNF215Q9UL58 517 aaPredicted RBP17.12■□□□□ 0.33
HIF3A-210ENST00000526506 CCDC194A0A1B0GVG4 234 aa17.11■□□□□ 0.33
HIF3A-210ENST00000526506 A0A1W2PPC1 479 aa17.11■□□□□ 0.33
HIF3A-210ENST00000526506 IPO5O00410 1097 aaKnown RBP17.11■□□□□ 0.33
HIF3A-210ENST00000526506 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
HIF3A-210ENST00000526506 HABP4Q5JVS0 413 aaKnown RBP17.11■□□□□ 0.33
HIF3A-210ENST00000526506 UTP14CQ5TAP6 766 aaKnown RBP17.11■□□□□ 0.33
HIF3A-210ENST00000526506 PPP1R12CQ9BZL4 782 aa17.11■□□□□ 0.33
HIF3A-210ENST00000526506 GTF2IRD1Q9UHL9 959 aa17.11■□□□□ 0.33
HIF3A-210ENST00000526506 NOD1Q9Y239 953 aa17.11■□□□□ 0.33
HIF3A-210ENST00000526506 DOCK5Q9H7D0 1870 aa17.1■□□□□ 0.33
HIF3A-210ENST00000526506 GSTTP1A0A1W2PQM5 241 aa17.1■□□□□ 0.33
HIF3A-210ENST00000526506 EDIL3O43854 480 aa17.1■□□□□ 0.33
HIF3A-210ENST00000526506 CYP2C9P11712 490 aa17.1■□□□□ 0.33
HIF3A-210ENST00000526506 KRT2P35908 639 aa17.1■□□□□ 0.33
HIF3A-210ENST00000526506 MCM2P49736 904 aa17.1■□□□□ 0.33
HIF3A-210ENST00000526506 FPGSQ05932 587 aa17.1■□□□□ 0.33
HIF3A-210ENST00000526506 PTGISQ16647 500 aa17.1■□□□□ 0.33
HIF3A-210ENST00000526506 MFSD5Q6N075 450 aa17.1■□□□□ 0.33
HIF3A-210ENST00000526506 TRIM50Q86XT4 487 aa17.1■□□□□ 0.33
HIF3A-210ENST00000526506 OXER1Q8TDS5 423 aa17.1■□□□□ 0.33
HIF3A-210ENST00000526506 LENG9Q96B70 501 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms