RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 ZNF16P17020 682 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-209ENST00000525132 MAOBP27338 520 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 PREPP48147 710 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 RTP1P59025 263 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 AP3B2Q13367 1082 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 TNIP1Q15025 636 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 DUOXA2Q1HG44 320 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 KIF4BQ2VIQ3 1234 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 ANKRD34AQ69YU3 496 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 DTHD1Q6ZMT9 781 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 ARMC9Q7Z3E5 817 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 C2CD4AQ8NCU7 369 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-209ENST00000525132 HNRNPLLQ8WVV9 542 aaKnown RBP4.41□□□□□ -1.7
CSDE1-209ENST00000525132 WDR18Q9BV38 432 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 CCDC86Q9H6F5 360 aaKnown RBP4.41□□□□□ -1.7
CSDE1-209ENST00000525132 KRT82Q9NSB4 513 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 ATG3Q9NT62 314 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 TMEM39AQ9NV64 488 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 ATP11BQ9Y2G3 1177 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 MYH14Q7Z406 1995 aaKnown RBP4.41□□□□□ -1.7
CSDE1-209ENST00000525132 LRRK2Q5S007 2527 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 TNKSO95271 1327 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 ADGRF5Q8IZF2 1346 aa4.41□□□□□ -1.7
CSDE1-209ENST00000525132 FLNCQ14315 2725 aa4.4□□□□□ -1.7
CSDE1-209ENST00000525132 GSTP1P09211 210 aaKnown RBP4.4□□□□□ -1.71
CSDE1-209ENST00000525132 MYOGP15173 224 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 CDK11BP21127 795 aaKnown RBP4.4□□□□□ -1.71
CSDE1-209ENST00000525132 NME2P22392 152 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 EIF4BP23588 611 aaKnown RBP4.4□□□□□ -1.71
CSDE1-209ENST00000525132 NTF4P34130 210 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 ARL4DP49703 201 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 FLT3LGP49771 235 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 GSTM4Q03013 218 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 DOC2BQ14184 412 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 UBXN11Q5T124 520 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 MEI1Q5TIA1 1274 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 SCARA3Q6AZY7 606 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 PRR23CQ6ZRP0 262 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 EZH1Q92800 747 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-209ENST00000525132 GAL3ST3Q96A11 431 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 WDR89Q96FK6 387 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-209ENST00000525132 CRELD1Q96HD1 420 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 MYRFLQ96LU7 910 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 RIPOR3Q96MK2 946 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.4□□□□□ -1.71
CSDE1-209ENST00000525132 RUSC1Q9BVN2 902 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 POGKQ9P215 609 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 CPA4Q9UI42 421 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 ANGEL1Q9UNK9 670 aaKnown RBP4.4□□□□□ -1.71
CSDE1-209ENST00000525132 NOTCH1P46531 2555 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 PDZD2O15018 2839 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 AKAP13Q12802 2813 aa4.4□□□□□ -1.71
CSDE1-209ENST00000525132 CYP11A1P05108 521 aa4.39□□□□□ -1.71
CSDE1-209ENST00000525132 ADH5P11766 374 aa4.39□□□□□ -1.71
CSDE1-209ENST00000525132 VAMP1P23763 118 aa4.39□□□□□ -1.71
CSDE1-209ENST00000525132 ARNTP27540 789 aa4.39□□□□□ -1.71
CSDE1-209ENST00000525132 CRKLP46109 303 aaKnown RBP4.39□□□□□ -1.71
CSDE1-209ENST00000525132 POU4F3Q15319 338 aa4.39□□□□□ -1.71
CSDE1-209ENST00000525132 ANGPT1Q15389 498 aa4.39□□□□□ -1.71
CSDE1-209ENST00000525132 EXOSC6Q5RKV6 272 aaKnown RBP4.39□□□□□ -1.71
CSDE1-209ENST00000525132 SV2BQ7L1I2 683 aa4.39□□□□□ -1.71
CSDE1-209ENST00000525132 SULF2Q8IWU5 870 aa4.39□□□□□ -1.71
CSDE1-209ENST00000525132 FAM177A1Q8N128 213 aaPredicted RBP4.39□□□□□ -1.71
CSDE1-209ENST00000525132 BRI3BPQ8WY22 251 aa4.39□□□□□ -1.71
CSDE1-209ENST00000525132 DPF2Q92785 391 aa4.39□□□□□ -1.71
CSDE1-209ENST00000525132 HIF3AQ9Y2N7 669 aa4.39□□□□□ -1.71
CSDE1-209ENST00000525132 ATRQ13535 2644 aa4.39□□□□□ -1.71
CSDE1-209ENST00000525132 EIF3AQ14152 1382 aaKnown RBP4.39□□□□□ -1.71
CSDE1-209ENST00000525132 LRRC37AA6NMS7 1700 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 DOPEY2Q9Y3R5 2298 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 LAMB1P07942 1786 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 FAM177BA6PVY3 158 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 TMPRSS2O15393 492 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 DIAPH2O60879 1101 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 FBXO24O75426 580 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 TOP3BO95985 862 aaKnown RBP4.38□□□□□ -1.71
CSDE1-209ENST00000525132 NPR1P16066 1061 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 RABGGTBP53611 331 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 SERINC3Q13530 473 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 HIST2H2BCQ6DN03 193 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 C17orf99Q6UX52 265 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 SEZ6L2Q6UXD5 910 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 TPTE2Q6XPS3 522 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 FAM20CQ8IXL6 584 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 SUMF1Q8NBK3 374 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 GRIN3AQ8TCU5 1115 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 NEK9Q8TD19 979 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 GIPC2Q8TF65 315 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 NOC4LQ9BVI4 516 aaKnown RBP4.38□□□□□ -1.71
CSDE1-209ENST00000525132 USP26Q9BXU7 913 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 CEP41Q9BYV8 373 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 CEP44Q9C0F1 390 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 ACSS3Q9H6R3 686 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 KCNQ5Q9NR82 932 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 HSPBP1Q9NZL4 362 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 NCDNQ9UBB6 729 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 PPP1R9AQ9ULJ8 1098 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 AKAP2Q9Y2D5 859 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 TTC21BQ7Z4L5 1316 aa4.38□□□□□ -1.71
CSDE1-209ENST00000525132 KDRP35968 1356 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms