RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 LIFRP42702 1097 aa13.65□□□□□ -0.22
SPARC-206ENST00000524277 ANTXR2P58335 489 aa13.65□□□□□ -0.22
SPARC-206ENST00000524277 MRPS9P82933 396 aaKnown RBP13.65□□□□□ -0.22
SPARC-206ENST00000524277 SKIV2LQ15477 1246 aaKnown RBP13.65□□□□□ -0.22
SPARC-206ENST00000524277 PCNX4Q63HM2 1172 aa13.65□□□□□ -0.22
SPARC-206ENST00000524277 TRAF7Q6Q0C0 670 aa13.65□□□□□ -0.22
SPARC-206ENST00000524277 MICALL1Q8N3F8 863 aa13.65□□□□□ -0.22
SPARC-206ENST00000524277 ADAMTS19Q8TE59 1207 aa13.65□□□□□ -0.22
SPARC-206ENST00000524277 UHRF1Q96T88 793 aaPredicted RBP13.65□□□□□ -0.22
SPARC-206ENST00000524277 LY9Q9HBG7 655 aa13.65□□□□□ -0.22
SPARC-206ENST00000524277 BAZ2BQ9UIF8 2168 aaKnown RBP13.65□□□□□ -0.22
SPARC-206ENST00000524277 MYH7BA7E2Y1 1941 aa13.64□□□□□ -0.23
SPARC-206ENST00000524277 MAFGO15525 162 aa13.64□□□□□ -0.23
SPARC-206ENST00000524277 PRC1O43663 620 aa13.64□□□□□ -0.23
SPARC-206ENST00000524277 AMHP03971 560 aa13.64□□□□□ -0.23
SPARC-206ENST00000524277 THPOP40225 353 aa13.64□□□□□ -0.23
SPARC-206ENST00000524277 ERVK-21P61565 698 aa13.64□□□□□ -0.23
SPARC-206ENST00000524277 NFXL1Q6ZNB6 911 aa13.64□□□□□ -0.23
SPARC-206ENST00000524277 CYFIP1Q7L576 1253 aa13.64□□□□□ -0.23
SPARC-206ENST00000524277 TGS1Q96RS0 853 aaKnown RBP13.64□□□□□ -0.23
SPARC-206ENST00000524277 GPR20Q99678 358 aa13.64□□□□□ -0.23
SPARC-206ENST00000524277 RNPEPQ9H4A4 650 aa13.64□□□□□ -0.23
SPARC-206ENST00000524277 INSL6Q9Y581 213 aa13.64□□□□□ -0.23
SPARC-206ENST00000524277 PRRC2BQ5JSZ5 2229 aaKnown RBP13.63□□□□□ -0.23
SPARC-206ENST00000524277 RFXAPO00287 272 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 MEIS2O14770 477 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 SMIM10L2AP0DMW4 78 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 SMIM10L2BP0DMW5 78 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 BMP1P13497 986 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 ZNF200P98182 395 aaPredicted RBP13.63□□□□□ -0.23
SPARC-206ENST00000524277 GRB10Q13322 594 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 PLEKHG4Q58EX7 1191 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 SEPT8Q92599 483 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 APBB2Q92870 758 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 GPRASP2Q96D09 838 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 SAMD11Q96NU1 681 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 PSTPIP2Q9H939 334 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 CERS4Q9HA82 394 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 TAF6LQ9Y6J9 622 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 NRCAMQ92823 1304 aa13.63□□□□□ -0.23
SPARC-206ENST00000524277 EPOPA6NHQ4 379 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 SH2B2O14492 632 aaPredicted RBP13.62□□□□□ -0.23
SPARC-206ENST00000524277 RPLP2P05387 115 aaKnown RBP13.62□□□□□ -0.23
SPARC-206ENST00000524277 DEFB103AP81534 67 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 MBTPS1Q14703 1052 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 RNF20Q5VTR2 975 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 USP17L6PQ6QN14 398 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 SYNE3Q6ZMZ3 975 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 DBF4BQ8NFT6 615 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 PIBF1Q8WXW3 757 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 GPKOWQ92917 476 aaPredicted RBP eCLIP13.62□□□□□ -0.23
SPARC-206ENST00000524277 TNPO1Q92973 898 aaKnown RBP13.62□□□□□ -0.23
SPARC-206ENST00000524277 HLA-CQ95604 372 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 LSG1Q9H089 658 aaKnown RBP13.62□□□□□ -0.23
SPARC-206ENST00000524277 EHMT1Q9H9B1 1298 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 RTEL1Q9NZ71 1219 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 SLC12A7Q9Y666 1083 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 BDP1A6H8Y1 2624 aa13.62□□□□□ -0.23
SPARC-206ENST00000524277 MUC3AQ02505 3323 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 SLC27A2O14975 620 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 TREHO43280 583 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 SORBS3O60504 671 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 SEMA3FQ13275 785 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 HIC1Q14526 733 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 NECTIN1Q15223 517 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 FAM26DQ5JW98 314 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 TAF2Q6P1X5 1199 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 RPAINQ86UA6 219 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 SGMS1Q86VZ5 419 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 SRBD1Q8N5C6 995 aaKnown RBP13.61□□□□□ -0.23
SPARC-206ENST00000524277 FANCBQ8NB91 859 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 WNT8BQ93098 351 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 ESYT1Q9BSJ8 1104 aa13.61□□□□□ -0.23
SPARC-206ENST00000524277 LCHNA4D1U4 455 aa13.6□□□□□ -0.23
SPARC-206ENST00000524277 LINC01553A4QN01 128 aa13.6□□□□□ -0.23
SPARC-206ENST00000524277 SPDYE3A6NKU9 549 aa13.6□□□□□ -0.23
SPARC-206ENST00000524277 LPXNO60711 386 aa13.6□□□□□ -0.23
SPARC-206ENST00000524277 ARHGEF15O94989 841 aa13.6□□□□□ -0.23
SPARC-206ENST00000524277 ADAM17P78536 824 aa13.6□□□□□ -0.23
SPARC-206ENST00000524277 HTRA4P83105 476 aaPredicted RBP13.6□□□□□ -0.23
SPARC-206ENST00000524277 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
SPARC-206ENST00000524277 CREB3L3Q68CJ9 461 aa13.6□□□□□ -0.23
SPARC-206ENST00000524277 RSPH3Q86UC2 560 aa13.6□□□□□ -0.23
SPARC-206ENST00000524277 SEPT1Q8WYJ6 367 aa13.6□□□□□ -0.23
SPARC-206ENST00000524277 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
SPARC-206ENST00000524277 MYL10Q9BUA6 226 aa13.6□□□□□ -0.23
SPARC-206ENST00000524277 SETD4Q9NVD3 440 aa13.6□□□□□ -0.23
SPARC-206ENST00000524277 TCTN1Q2MV58 587 aa13.59□□□□□ -0.23
SPARC-206ENST00000524277 UTP14CQ5TAP6 766 aaKnown RBP13.59□□□□□ -0.23
SPARC-206ENST00000524277 FAM43BQ6ZT52 329 aaPredicted RBP13.59□□□□□ -0.23
SPARC-206ENST00000524277 MYOCDQ8IZQ8 938 aa13.59□□□□□ -0.23
SPARC-206ENST00000524277 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
SPARC-206ENST00000524277 TOP1MTQ969P6 601 aa13.59□□□□□ -0.23
SPARC-206ENST00000524277 GLT8D2Q9H1C3 349 aa13.59□□□□□ -0.23
SPARC-206ENST00000524277 SMARCAD1Q9H4L7 1026 aa13.59□□□□□ -0.23
SPARC-206ENST00000524277 BCAS3Q9H6U6 928 aa13.59□□□□□ -0.23
SPARC-206ENST00000524277 SUGCTQ9HAC7 445 aa13.59□□□□□ -0.23
SPARC-206ENST00000524277 RBM28Q9NW13 759 aaKnown RBP13.59□□□□□ -0.23
SPARC-206ENST00000524277 ERAP1Q9NZ08 941 aa13.59□□□□□ -0.23
SPARC-206ENST00000524277 hCG_1984214I3L0E3 225 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms