RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 PNPLA7Q6ZV29 1317 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 SSU72P8A0A1W2PR75 194 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 TRHP20396 242 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 GSCP56915 257 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 CDK17Q00537 523 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 KLHDC7AQ5VTJ3 777 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 RAPGEF5Q92565 580 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 DUSP9Q99956 384 aaKnown RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 NKIRAS1Q9NYS0 192 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 PNMA2Q9UL42 364 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 ATP6V0A2Q9Y487 856 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 TSPOAP1O95153 1857 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 KLRF2D3W0D1 207 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 CCDC188H7C350 402 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 SUN1O94901 812 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 PCP11498 1178 aaKnown RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 EIF3BP55884 814 aaKnown RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 CHRNDQ07001 517 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 DDR1Q08345 913 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 ADAM9Q13443 819 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 ALKBH5Q6P6C2 394 aaKnown RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 ARMC2Q8NEN0 867 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 NSMCE1Q8WV22 266 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 ZNF512BQ96KM6 892 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 MTRQ99707 1265 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 PANK4Q9NVE7 773 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 CNTNAP5Q8WYK1 1306 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 GNA14O95837 355 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 CACNB1Q02641 598 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 TROAPQ12815 778 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 ANKRD20A8PQ5CZ79 823 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 FIGNQ5HY92 759 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 NAIF1Q69YI7 327 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 GALNT17Q6IS24 598 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 CROCCP2Q86T23 111 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 USP38Q8NB14 1042 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 SAAL1Q96ER3 474 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 XPO6Q96QU8 1125 aaKnown RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 FAM167BQ9BTA0 163 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 YIPF3Q9GZM5 350 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 ZMYND12Q9H0C1 365 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 ISCUQ9H1K1 167 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 RIC8AQ9NPQ8 531 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 NOC2LQ9Y3T9 749 aaKnown RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 TUBGCP6Q96RT7 1819 aa9.86□□□□□ -0.83
CSMD1-212ENST00000523387 KDM6AO15550 1401 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-212ENST00000523387 TBCAO75347 108 aaKnown RBP9.85□□□□□ -0.83
CSMD1-212ENST00000523387 FGGP02679 453 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 GBP1P32455 592 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 TRIM28Q13263 835 aaKnown RBP9.85□□□□□ -0.83
CSMD1-212ENST00000523387 UNC13DQ70J99 1090 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 IQCKQ8N0W5 287 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 CCHCR1Q8TD31 782 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 TBCKQ8TEA7 893 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 CUL5Q93034 780 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 ARMCX3Q9UH62 379 aaPredicted RBP9.85□□□□□ -0.83
CSMD1-212ENST00000523387 TCRBV5S4A2TA0A5A2 114 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 CCT8L1PA6NM43 557 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 CYP2D6P10635 497 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 RBBP5Q15291 538 aaKnown RBP9.85□□□□□ -0.83
CSMD1-212ENST00000523387 SEC23AQ15436 765 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 TAF11Q15544 211 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 CAPRIN2Q6IMN6 1127 aaKnown RBP9.85□□□□□ -0.83
CSMD1-212ENST00000523387 ZNF662Q6ZS27 426 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 CCDC105Q8IYK2 499 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 PPP1R12CQ9BZL4 782 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 CPVLQ9H3G5 476 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 SAP30BPQ9UHR5 308 aaKnown RBP9.85□□□□□ -0.83
CSMD1-212ENST00000523387 ZNF263O14978 683 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 TTI1O43156 1089 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 DIAPH2O60879 1101 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 BAG3O95817 575 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 TNFAIP3P21580 790 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 GRIPAP1Q4V328 841 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.85□□□□□ -0.83
CSMD1-212ENST00000523387 KLHL14Q9P2G3 628 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 LEMD3Q9Y2U8 911 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 SNX24Q9Y343 169 aa9.85□□□□□ -0.83
CSMD1-212ENST00000523387 ENO4A6NNW6 628 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 OPLAHO14841 1288 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 CHN1P15882 459 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 STX2P32856 288 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 SSR1P43307 286 aaKnown RBP9.84□□□□□ -0.83
CSMD1-212ENST00000523387 ITGB3BPQ13352 177 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-212ENST00000523387 SLC18A3Q16572 532 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 EXOC3L4Q17RC7 722 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 SEL1L2Q5TEA6 688 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 LRP10Q7Z4F1 713 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 KCNV2Q8TDN2 545 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.84□□□□□ -0.83
CSMD1-212ENST00000523387 DDX12PQ92771 950 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 AZI2Q9H6S1 392 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 GDF3Q9NR23 364 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 ARPP21Q9UBL0 812 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-212ENST00000523387 STK17AQ9UEE5 414 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 MTUS1Q9ULD2 1270 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 FMN2Q9NZ56 1722 aa9.84□□□□□ -0.83
CSMD1-212ENST00000523387 PPP1R12AO14974 1030 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-212ENST00000523387 EPHB6O15197 1021 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms