RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ICA1Q05084 483 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 FPGSQ05932 587 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 KCTD2Q14681 263 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 SHHQ15465 462 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 PCSK7Q16549 785 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 HSP90AB4PQ58FF6 505 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 PERM1Q5SV97 790 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 TATDN1Q6P1N9 297 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 TMEM179Q6ZVK1 233 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 ADGRA1Q86SQ6 560 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 FAM35AQ86V20 835 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 SHCBP1Q8NEM2 672 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 ACER1Q8TDN7 264 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 NUP133Q8WUM0 1156 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 TTC9Q92623 222 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 FERMT2Q96AC1 680 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 VTI1AQ96AJ9 217 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 IFT43Q96FT9 208 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 MMP19Q99542 508 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 MOV10L1Q9BXT6 1211 aaKnown RBP7.5□□□□□ -1.21
PABPC1-220ENST00000522658 CCDC8Q9H0W5 538 aaPredicted RBP7.5□□□□□ -1.21
PABPC1-220ENST00000522658 MTIF3Q9H2K0 278 aaKnown RBP7.5□□□□□ -1.21
PABPC1-220ENST00000522658 SPC25Q9HBM1 224 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 PIH1D3Q9NQM4 214 aaKnown RBP7.5□□□□□ -1.21
PABPC1-220ENST00000522658 PDLIM7Q9NR12 457 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 TMEM39AQ9NV64 488 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 BTBD7Q9P203 1132 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 SWAP70Q9UH65 585 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 MYH1P12882 1939 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 ZNF236Q9UL36 1845 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 MROH7Q68CQ1 1323 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 AKR1A1P14550 325 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 CPB1P15086 417 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 WEE1P30291 646 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 JAG1P78504 1218 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 SEPT2Q15019 361 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 LRRC41Q15345 812 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 FAM47AQ5JRC9 791 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 C9orf50Q5SZB4 431 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 ZKSCAN2Q63HK3 967 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 DHX32Q7L7V1 743 aaKnown RBP7.49□□□□□ -1.21
PABPC1-220ENST00000522658 AACSQ86V21 672 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 FBXO11Q86XK2 927 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 ABRAQ8N0Z2 381 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 TP53INP1Q96A56 240 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 ZNF512BQ96KM6 892 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-220ENST00000522658 DNAJC2Q99543 621 aaKnown RBP7.49□□□□□ -1.21
PABPC1-220ENST00000522658 STARD7Q9NQZ5 370 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 NRBP1Q9UHY1 535 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 ISY1Q9ULR0 285 aaKnown RBP7.49□□□□□ -1.21
PABPC1-220ENST00000522658 LTBP2Q14767 1821 aa7.49□□□□□ -1.21
PABPC1-220ENST00000522658 WDR46O15213 610 aaKnown RBP7.48□□□□□ -1.21
PABPC1-220ENST00000522658 TLR3O15455 904 aaKnown RBP7.48□□□□□ -1.21
PABPC1-220ENST00000522658 BCAR3O75815 825 aa7.48□□□□□ -1.21
PABPC1-220ENST00000522658 IFIT2P09913 472 aaKnown RBP7.48□□□□□ -1.21
PABPC1-220ENST00000522658 TARSP26639 723 aaKnown RBP7.48□□□□□ -1.21
PABPC1-220ENST00000522658 ARSDP51689 593 aa7.48□□□□□ -1.21
PABPC1-220ENST00000522658 GPLD1P80108 840 aa7.48□□□□□ -1.21
PABPC1-220ENST00000522658 PPIGQ13427 754 aaKnown RBP eCLIP7.48□□□□□ -1.211e-6■□□□□ 8.6
PABPC1-220ENST00000522658 SLC9C2Q5TAH2 1124 aa7.48□□□□□ -1.21
PABPC1-220ENST00000522658 SPICE1Q8N0Z3 855 aa7.48□□□□□ -1.21
PABPC1-220ENST00000522658 PPM1EQ8WY54 764 aa7.48□□□□□ -1.21
PABPC1-220ENST00000522658 MYO19Q96H55 970 aa7.48□□□□□ -1.21
PABPC1-220ENST00000522658 MAML3Q96JK9 1138 aa7.48□□□□□ -1.21
PABPC1-220ENST00000522658 CDK5RAP2Q96SN8 1893 aa7.48□□□□□ -1.21
PABPC1-220ENST00000522658 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.48□□□□□ -1.21
PABPC1-220ENST00000522658 C1orf115Q9H7X2 142 aa7.48□□□□□ -1.21
PABPC1-220ENST00000522658 DBNLQ9UJU6 430 aaKnown RBP7.48□□□□□ -1.21
PABPC1-220ENST00000522658 ZHX1Q9UKY1 873 aaPredicted RBP7.48□□□□□ -1.21
PABPC1-220ENST00000522658 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.48□□□□□ -1.21
PABPC1-220ENST00000522658 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-220ENST00000522658 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-220ENST00000522658 A0A1W2PQ45 241 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-220ENST00000522658 A0A1W2PQY0 241 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 MICAL2O94851 1124 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 PGK1P00558 417 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 SHMT1P34896 483 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 TLE2Q04725 743 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 LRP8Q14114 963 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 SNX17Q15036 470 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 CLASRPQ8N2M8 674 aaKnown RBP7.47□□□□□ -1.21
PABPC1-220ENST00000522658 TMEM57Q8N5G2 664 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 SLC44A5Q8NCS7 719 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 TRPV1Q8NER1 839 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 TIFAQ96CG3 184 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 ATG4CQ96DT6 458 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 DDX11Q96FC9 970 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 CCDC17Q96LX7 622 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 GLT1D1Q96MS3 346 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 VCPKMTQ9H867 229 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 TLR7Q9NYK1 1049 aaKnown RBP7.47□□□□□ -1.21
PABPC1-220ENST00000522658 THEGQ9P2T0 379 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 MSRAQ9UJ68 235 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 UNC80Q8N2C7 3258 aa7.47□□□□□ -1.21
PABPC1-220ENST00000522658 TRIM43BA6NCK2 446 aa7.46□□□□□ -1.22
PABPC1-220ENST00000522658 GOLIM4O00461 696 aa7.46□□□□□ -1.22
PABPC1-220ENST00000522658 OPLAHO14841 1288 aa7.46□□□□□ -1.22
PABPC1-220ENST00000522658 COBLO75128 1261 aa7.46□□□□□ -1.22
PABPC1-220ENST00000522658 HMMRO75330 724 aa7.46□□□□□ -1.22
PABPC1-220ENST00000522658 PDE6AP16499 860 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms