RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 SGSM2O43147 1006 aa6.63□□□□□ -1.35
HMGB1P1-201ENST00000522557 EFCAB14O75071 495 aa6.63□□□□□ -1.35
HMGB1P1-201ENST00000522557 PLA2G1BP04054 148 aaKnown RBP6.63□□□□□ -1.35
HMGB1P1-201ENST00000522557 ANAPC15P60006 121 aa6.63□□□□□ -1.35
HMGB1P1-201ENST00000522557 SLC9A5Q14940 896 aa6.63□□□□□ -1.35
HMGB1P1-201ENST00000522557 PRPF38AQ8NAV1 312 aaKnown RBP6.63□□□□□ -1.35
HMGB1P1-201ENST00000522557 CHAC2Q8WUX2 184 aa6.63□□□□□ -1.35
HMGB1P1-201ENST00000522557 KCTD13Q8WZ19 329 aa6.63□□□□□ -1.35
HMGB1P1-201ENST00000522557 DDX1Q92499 740 aaKnown RBP6.63□□□□□ -1.35
HMGB1P1-201ENST00000522557 PTPRN2Q92932 1015 aa6.63□□□□□ -1.35
HMGB1P1-201ENST00000522557 TRMT2BQ96GJ1 504 aaKnown RBP6.63□□□□□ -1.35
HMGB1P1-201ENST00000522557 ATP8A1Q9Y2Q0 1164 aa6.63□□□□□ -1.35
HMGB1P1-201ENST00000522557 TRIM13O60858 407 aa6.62□□□□□ -1.35
HMGB1P1-201ENST00000522557 ZBTB7AO95365 584 aa6.62□□□□□ -1.35
HMGB1P1-201ENST00000522557 KCNA6P17658 529 aa6.62□□□□□ -1.35
HMGB1P1-201ENST00000522557 MARCH10Q8NA82 808 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P1-201ENST00000522557 TMEM169Q96HH4 297 aa6.62□□□□□ -1.35
HMGB1P1-201ENST00000522557 CHAMP1Q96JM3 812 aa6.62□□□□□ -1.35
HMGB1P1-201ENST00000522557 MTFR1LQ9H019 292 aa6.62□□□□□ -1.35
HMGB1P1-201ENST00000522557 RNF38Q9H0F5 515 aa6.62□□□□□ -1.35
HMGB1P1-201ENST00000522557 KLHL42Q9P2K6 505 aa6.62□□□□□ -1.35
HMGB1P1-201ENST00000522557 FAN1Q9Y2M0 1017 aa6.62□□□□□ -1.35
HMGB1P1-201ENST00000522557 X6R8D5 127 aa6.62□□□□□ -1.35
HMGB1P1-201ENST00000522557 TCRBV16S1A1N1A0A5B0 115 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 BLACEA4D250 179 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 FFAR3O14843 346 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 MYO1BO43795 1136 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 MSCO60682 206 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 NPTXRO95502 500 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 INHBBP09529 407 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 GTF2A2P52657 109 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 LSAMPQ13449 338 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 ZNF460Q14592 562 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 SEPT7Q16181 437 aaKnown RBP6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 RSPO2Q6UXX9 243 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 TTLL10Q6ZVT0 673 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 DCP2Q8IU60 420 aaKnown RBP6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 Q8N1Y9 231 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 TP53I13Q8NBR0 393 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 FNIP1Q8TF40 1166 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 NOX5Q96PH1 765 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 SYT3Q9BQG1 590 aa6.61□□□□□ -1.35
HMGB1P1-201ENST00000522557 ARVCFO00192 962 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 PDGFRBP09619 1106 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 SOX5P35711 763 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 CACNB2Q08289 660 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 MROH9Q5TGP6 573 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 USP53Q70EK8 1073 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 B3GNT8Q7Z7M8 397 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 DDX42Q86XP3 938 aaKnown RBP eCLIP6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 RIOX2Q8IUF8 465 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 ADGRG2Q8IZP9 1017 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 PPM1KQ8N3J5 372 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 SMARCC2Q8TAQ2 1214 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 DCAF4Q8WV16 495 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 KCNC2Q96PR1 638 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 AP5M1Q9H0R1 490 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 ZCCHC4Q9H5U6 513 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 METTL14Q9HCE5 456 aaKnown RBP6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 PARD6AQ9NPB6 346 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 CLDND1Q9NY35 253 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 PALD1Q9ULE6 856 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 PMF1-BGLAPU3KQ54 211 aa6.6□□□□□ -1.35
HMGB1P1-201ENST00000522557 WNT9AO14904 365 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 ASLP04424 464 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 HOXA5P20719 270 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 PKN3Q6P5Z2 889 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 ABHD17CQ6PCB6 329 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 KCNT2Q6UVM3 1135 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 MILR1Q7Z6M3 343 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 STRA8Q7Z7C7 330 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 FAM26EQ8N5C1 309 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 LINC01356Q8N9X3 169 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 CPA5Q8WXQ8 436 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 SEC14L1Q92503 715 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 DDX11Q96FC9 970 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 ZFYVE21Q9BQ24 234 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 CDIP1Q9H305 208 aa6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 TNPO3Q9Y5L0 923 aaKnown RBP6.59□□□□□ -1.35
HMGB1P1-201ENST00000522557 A0A1B0GTL3 188 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 H7BY64 318 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 RASGRP1O95267 797 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 SLC6A11P48066 632 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 HTRA3P83110 453 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 DHCR24Q15392 516 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 VWA3BQ502W6 1294 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 SYT8Q8NBV8 401 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 ZNF526Q8TF50 670 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 C20orf173Q96LM9 149 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 IPO9Q96P70 1041 aaKnown RBP6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 PHF20Q9BVI0 1012 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 JAM3Q9BX67 310 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 GPR27Q9NS67 375 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 PPARGC1AQ9UBK2 798 aaKnown RBP6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 NDOR1Q9UHB4 597 aa6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 COA3Q9Y2R0 106 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P1-201ENST00000522557 C8BP07358 591 aa6.57□□□□□ -1.36
HMGB1P1-201ENST00000522557 BPIP17213 487 aa6.57□□□□□ -1.36
HMGB1P1-201ENST00000522557 IGFALSP35858 605 aa6.57□□□□□ -1.36
HMGB1P1-201ENST00000522557 RBM10P98175 930 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms