RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 MRPS9P82933 396 aaKnown RBP7.75□□□□□ -1.17
SPIDR-218ENST00000522222 PURAQ00577 322 aaKnown RBP7.75□□□□□ -1.17
SPIDR-218ENST00000522222 STK3Q13188 491 aa7.75□□□□□ -1.17
SPIDR-218ENST00000522222 SEMA3FQ13275 785 aa7.75□□□□□ -1.17
SPIDR-218ENST00000522222 PKN1Q16512 942 aa7.75□□□□□ -1.17
SPIDR-218ENST00000522222 PCNX4Q63HM2 1172 aa7.75□□□□□ -1.17
SPIDR-218ENST00000522222 ANKRD33Q7Z3H0 272 aa7.75□□□□□ -1.17
SPIDR-218ENST00000522222 AFG1LQ8WV93 481 aa7.75□□□□□ -1.17
SPIDR-218ENST00000522222 PGBD1Q96JS3 809 aa7.75□□□□□ -1.17
SPIDR-218ENST00000522222 INPP4AQ96PE3 977 aaPredicted RBP7.75□□□□□ -1.17
SPIDR-218ENST00000522222 SLC26A6Q9BXS9 759 aa7.75□□□□□ -1.17
SPIDR-218ENST00000522222 RNF26Q9BY78 433 aaPredicted RBP7.75□□□□□ -1.17
SPIDR-218ENST00000522222 SCAND2PQ9GZW5 306 aaPredicted RBP7.75□□□□□ -1.17
SPIDR-218ENST00000522222 PRO3102Q9H379 93 aa7.75□□□□□ -1.17
SPIDR-218ENST00000522222 RIC8AQ9NPQ8 531 aa7.75□□□□□ -1.17
SPIDR-218ENST00000522222 RBM27Q9P2N5 1060 aaKnown RBP7.75□□□□□ -1.17
SPIDR-218ENST00000522222 DDX41Q9UJV9 622 aaKnown RBP7.75□□□□□ -1.17
SPIDR-218ENST00000522222 TPCN1Q9ULQ1 816 aa7.75□□□□□ -1.17
SPIDR-218ENST00000522222 COLQQ9Y215 455 aaPredicted RBP7.75□□□□□ -1.17
SPIDR-218ENST00000522222 GRIN2DO15399 1336 aa7.75□□□□□ -1.17
SPIDR-218ENST00000522222 DNAH12Q6ZR08 3092 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 ESYT2A0FGR8 921 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 TRIM43BA6NCK2 446 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 A6NJR5 290 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 SPDYE3A6NKU9 549 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 ARVCFO00192 962 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 CPLX1O14810 134 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 ADAMTS3O15072 1205 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 PRPF3O43395 683 aaKnown RBP7.74□□□□□ -1.17
SPIDR-218ENST00000522222 FIBPO43427 364 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 LARGE1O95461 756 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 GGPS1O95749 300 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 CLTBP09497 229 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 ZNF286BP0CG31 522 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 SYT1P21579 422 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 KRT85P78386 507 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 HMGN5P82970 282 aaKnown RBP7.74□□□□□ -1.17
SPIDR-218ENST00000522222 AKAP17AQ02040 695 aaKnown RBP7.74□□□□□ -1.17
SPIDR-218ENST00000522222 ITGA7Q13683 1181 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 HSP90AA2PQ14568 343 aaPredicted RBP7.74□□□□□ -1.17
SPIDR-218ENST00000522222 GNPTABQ3T906 1256 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 BRDTQ58F21 947 aaPredicted RBP7.74□□□□□ -1.17
SPIDR-218ENST00000522222 XRRA1Q6P2D8 792 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 SH3RF1Q7Z6J0 888 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 TEX2Q8IWB9 1127 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 FAM126BQ8IXS8 530 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 SLC43A3Q8NBI5 491 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 PPTC7Q8NI37 304 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 EMID1Q96A84 441 aaPredicted RBP7.74□□□□□ -1.17
SPIDR-218ENST00000522222 VTI1AQ96AJ9 217 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 TRIM43Q96BQ3 446 aaPredicted RBP7.74□□□□□ -1.17
SPIDR-218ENST00000522222 ZNF274Q96GC6 653 aaPredicted RBP7.74□□□□□ -1.17
SPIDR-218ENST00000522222 GDF15Q99988 308 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 MTG1Q9BT17 334 aaPredicted RBP7.74□□□□□ -1.17
SPIDR-218ENST00000522222 ANO3Q9BYT9 981 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 EHMT1Q9H9B1 1298 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 POLR3EQ9NVU0 708 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 TMEM260Q9NX78 707 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 RTEL1Q9NZ71 1219 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 VPS54Q9P1Q0 977 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 PRKAG2Q9UGJ0 569 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 TBX21Q9UL17 535 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 PCDHA6Q9UN73 950 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 PCDHA8Q9Y5H6 950 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 MROH7Q68CQ1 1323 aa7.74□□□□□ -1.17
SPIDR-218ENST00000522222 RANBP2P49792 3224 aaKnown RBP7.73□□□□□ -1.17
SPIDR-218ENST00000522222 DOCK5Q9H7D0 1870 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 SMCO2A6NFE2 343 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 DCDC2CA8MYV0 355 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 KIAA0355O15063 1070 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 PFKFB2O60825 505 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 STAM2O75886 525 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 CCDC192P0DO97 292 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 HOXD8P13378 290 aaPredicted RBP7.73□□□□□ -1.17
SPIDR-218ENST00000522222 ITGB5P18084 799 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 GJB2P29033 226 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 ICAM3P32942 547 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 SREBF1P36956 1147 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 CLK2P49760 499 aaKnown RBP7.73□□□□□ -1.17
SPIDR-218ENST00000522222 CDK7P50613 346 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 MDM2Q00987 491 aaPredicted RBP7.73□□□□□ -1.17
SPIDR-218ENST00000522222 SP2Q02086 613 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 FAAP100Q0VG06 881 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 SCRN1Q12765 414 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 AP3B2Q13367 1082 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 HABP4Q5JVS0 413 aaKnown RBP7.73□□□□□ -1.17
SPIDR-218ENST00000522222 CELF3Q5SZQ8 465 aaKnown RBP7.73□□□□□ -1.17
SPIDR-218ENST00000522222 KCNV1Q6PIU1 500 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 DHX37Q8IY37 1157 aaKnown RBP7.73□□□□□ -1.17
SPIDR-218ENST00000522222 TRIM22Q8IYM9 498 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 CCDC148Q8NFR7 591 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 RASGRP4Q8TDF6 673 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 CCDC12Q8WUD4 166 aaPredicted RBP7.73□□□□□ -1.17
SPIDR-218ENST00000522222 PPP1R13LQ8WUF5 828 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 SPATA33Q96N06 139 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 TOX2Q96NM4 488 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 AIFM3Q96NN9 605 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 GLT8D2Q9H1C3 349 aa7.73□□□□□ -1.17
SPIDR-218ENST00000522222 DDX19AQ9NUU7 478 aaKnown RBP7.73□□□□□ -1.17
SPIDR-218ENST00000522222 USP25Q9UHP3 1055 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms