RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 HERVK_113P62684 666 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 IRX6P78412 446 aaPredicted RBP7.06□□□□□ -1.28
SPIDR-216ENST00000521918 GPLD1P80108 840 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 PLAURQ03405 335 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 ICA1Q05084 483 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 PRKCZQ05513 592 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 PABPC4Q13310 644 aaKnown RBP eCLIP7.06□□□□□ -1.28
SPIDR-216ENST00000521918 DSC3Q14574 896 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 KIF22Q14807 665 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 LRRFIP1Q32MZ4 808 aaKnown RBP7.06□□□□□ -1.28
SPIDR-216ENST00000521918 TTC39BQ5VTQ0 682 aaPredicted RBP7.06□□□□□ -1.28
SPIDR-216ENST00000521918 LBX2Q6XYB7 198 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 CCDC129Q6ZRS4 1044 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 IFNL3Q8IZI9 196 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 ANKRD13CQ8N6S4 541 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 EVI5LQ96CN4 794 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 CCDC17Q96LX7 622 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 DMRTB1Q96MA1 342 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 P2RX7Q99572 595 aaKnown RBP7.06□□□□□ -1.28
SPIDR-216ENST00000521918 CABP5Q9NP86 173 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 TMOD4Q9NZQ9 345 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 SLC6A14Q9UN76 642 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 GABRQQ9UN88 632 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 TACC3Q9Y6A5 838 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 CEP290O15078 2479 aa7.06□□□□□ -1.28
SPIDR-216ENST00000521918 ZMYM6O95789 1325 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 MYPNQ86TC9 1320 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 TREHO43280 583 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 KIF4AO95239 1232 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 PSAPP07602 524 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 HOXB4P17483 251 aaPredicted RBP7.05□□□□□ -1.28
SPIDR-216ENST00000521918 FCGRTP55899 365 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 IRX3P78415 501 aaPredicted RBP7.05□□□□□ -1.28
SPIDR-216ENST00000521918 TBC1D8BQ0IIM8 1120 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 ARHGEF6Q15052 776 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 ZYXQ15942 572 aaKnown RBP7.05□□□□□ -1.28
SPIDR-216ENST00000521918 SLC9C1Q4G0N8 1177 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 VPS53Q5VIR6 699 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 CATSPERGQ6ZRH7 1159 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 ZNF589Q86UQ0 364 aaPredicted RBP7.05□□□□□ -1.28
SPIDR-216ENST00000521918 SNX29Q8TEQ0 813 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 SH3TC2Q8TF17 1288 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 FAM227BQ96M60 508 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 FEZ1Q99689 392 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 IGFLR1Q9H665 355 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 HELLSQ9NRZ9 838 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 RBPJLQ9UBG7 517 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.05□□□□□ -1.28
SPIDR-216ENST00000521918 TMX2Q9Y320 296 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 STARD13Q9Y3M8 1113 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 ZNF236Q9UL36 1845 aa7.05□□□□□ -1.28
SPIDR-216ENST00000521918 LAMA4Q16363 1823 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 MPHOSPH10O00566 681 aaKnown RBP7.04□□□□□ -1.28
SPIDR-216ENST00000521918 GSPT1P15170 499 aaKnown RBP7.04□□□□□ -1.28
SPIDR-216ENST00000521918 TDO2P48775 406 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 FLT3LGP49771 235 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 ERVK-24P63145 666 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 MLLT1Q03111 559 aaPredicted RBP7.04□□□□□ -1.28
SPIDR-216ENST00000521918 PPARAQ07869 468 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 NMIQ13287 307 aaPredicted RBP7.04□□□□□ -1.28
SPIDR-216ENST00000521918 ORC1Q13415 861 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 ALX1Q15699 326 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 CHSY3Q70JA7 882 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 AMOTL1Q8IY63 956 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 NEDD1Q8NHV4 660 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 USP6NLQ92738 828 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 SHISA4Q96DD7 197 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 BTBD6Q96KE9 485 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 NSUN5Q96P11 429 aaKnown RBP7.04□□□□□ -1.28
SPIDR-216ENST00000521918 NIF3L1Q9GZT8 377 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 PORCNQ9H237 461 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 RPAP3Q9H6T3 665 aaPredicted RBP7.04□□□□□ -1.28
SPIDR-216ENST00000521918 VCPKMTQ9H867 229 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 BTBD7Q9P203 1132 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 ANAPC4Q9UJX5 808 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 GJD2Q9UKL4 321 aa7.04□□□□□ -1.28
SPIDR-216ENST00000521918 CCDC171Q6TFL3 1326 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 TNPO2O14787 897 aaKnown RBP7.03□□□□□ -1.28
SPIDR-216ENST00000521918 EREGO14944 169 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 PRDM1O75626 825 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 FGRP09769 529 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 EEF2P13639 858 aaKnown RBP7.03□□□□□ -1.28
SPIDR-216ENST00000521918 HOXD10P28358 340 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 GRK4P32298 578 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 PCSK7Q16549 785 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 C20orf204Q6ZNR8 217 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 HFE2Q6ZVN8 426 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 LPAR1Q92633 364 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 NAPBQ9H115 298 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 IL25Q9H293 177 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 KANSL2Q9H9L4 492 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 NYAP2Q9P242 653 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 KANSL3Q9P2N6 904 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 SALL4Q9UJQ4 1053 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 RABGAP1Q9Y3P9 1069 aa7.03□□□□□ -1.28
SPIDR-216ENST00000521918 DNAH12Q6ZR08 3092 aa7.02□□□□□ -1.29
SPIDR-216ENST00000521918 COL11A1P12107 1806 aaPredicted RBP7.02□□□□□ -1.29
SPIDR-216ENST00000521918 LAMA3Q16787 3333 aa7.02□□□□□ -1.29
SPIDR-216ENST00000521918 MYH4Q9Y623 1939 aa7.02□□□□□ -1.29
SPIDR-216ENST00000521918 MINDY4BA8MYZ0 360 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms