RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 ZP2Q05996 745 aa12.43□□□□□ -0.42
MRPS28-208ENST00000521605 NBPF20Q3BBV1 942 aa12.43□□□□□ -0.42
MRPS28-208ENST00000521605 PUS10Q3MIT2 529 aaKnown RBP12.43□□□□□ -0.42
MRPS28-208ENST00000521605 IQSEC1Q6DN90 963 aa12.43□□□□□ -0.42
MRPS28-208ENST00000521605 TAPT1Q6NXT6 567 aa12.43□□□□□ -0.42
MRPS28-208ENST00000521605 NFXL1Q6ZNB6 911 aa12.43□□□□□ -0.42
MRPS28-208ENST00000521605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.43□□□□□ -0.42
MRPS28-208ENST00000521605 ZNF654Q8IZM8 581 aa12.43□□□□□ -0.42
MRPS28-208ENST00000521605 ENAHQ8N8S7 591 aaPredicted RBP12.43□□□□□ -0.42
MRPS28-208ENST00000521605 GPT2Q8TD30 523 aa12.43□□□□□ -0.42
MRPS28-208ENST00000521605 C8orf76Q96K31 380 aa12.43□□□□□ -0.42
MRPS28-208ENST00000521605 ZNF396Q96N95 335 aaPredicted RBP12.43□□□□□ -0.42
MRPS28-208ENST00000521605 RNF146Q9NTX7 359 aa12.43□□□□□ -0.42
MRPS28-208ENST00000521605 POLR3EQ9NVU0 708 aa12.43□□□□□ -0.42
MRPS28-208ENST00000521605 MORC2Q9Y6X9 1032 aaPredicted RBP12.43□□□□□ -0.42
MRPS28-208ENST00000521605 PLIN4Q96Q06 1357 aa12.43□□□□□ -0.42
MRPS28-208ENST00000521605 CACNA1AO00555 2505 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 LINC01553A4QN01 128 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 ERVK-21P61565 698 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 PURAQ00577 322 aaKnown RBP12.42□□□□□ -0.42
MRPS28-208ENST00000521605 DNM1Q05193 864 aaKnown RBP12.42□□□□□ -0.42
MRPS28-208ENST00000521605 TROAPQ12815 778 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 BFSP2Q13515 415 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 RTN1Q16799 776 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 IFIT1BQ5T764 474 aaKnown RBP12.42□□□□□ -0.42
MRPS28-208ENST00000521605 IER5LQ5T953 404 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 CATIPQ7Z7H3 387 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 TRIM22Q8IYM9 498 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 FANCBQ8NB91 859 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 NEK9Q8TD19 979 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 MTG1Q9BT17 334 aaPredicted RBP12.42□□□□□ -0.42
MRPS28-208ENST00000521605 RNF26Q9BY78 433 aaPredicted RBP12.42□□□□□ -0.42
MRPS28-208ENST00000521605 FAM86C1Q9NVL1 165 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 CLIP2Q9UDT6 1046 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 MUTYHQ9UIF7 546 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 Q9Y3F1 56 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 ZNF318Q5VUA4 2279 aa12.42□□□□□ -0.42
MRPS28-208ENST00000521605 TRIOO75962 3097 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 GFRA3O60609 400 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 DEXIO95424 95 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 IRS1P35568 1242 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 OAZ1P54368 228 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 PTPN5P54829 565 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 MICU3Q86XE3 530 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 FBXO22Q8NEZ5 403 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 PURBQ96QR8 312 aaKnown RBP12.41□□□□□ -0.42
MRPS28-208ENST00000521605 RAD9AQ99638 391 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 C17orf80Q9BSJ5 609 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 FEM1BQ9UK73 627 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 RCOR1Q9UKL0 485 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 TET1Q8NFU7 2136 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 SIP14410 1827 aa12.41□□□□□ -0.42
MRPS28-208ENST00000521605 C5orf42Q9H799 3197 aa12.4□□□□□ -0.42
MRPS28-208ENST00000521605 GOLGA6L3A6NEY3 463 aa12.4□□□□□ -0.42
MRPS28-208ENST00000521605 RANBP6O60518 1105 aaKnown RBP12.4□□□□□ -0.42
MRPS28-208ENST00000521605 GJB5O95377 273 aa12.4□□□□□ -0.42
MRPS28-208ENST00000521605 ALAS1P13196 640 aa12.4□□□□□ -0.42
MRPS28-208ENST00000521605 CDC27P30260 824 aa12.4□□□□□ -0.42
MRPS28-208ENST00000521605 ADD1P35611 737 aaKnown RBP12.4□□□□□ -0.42
MRPS28-208ENST00000521605 CPT1AP50416 773 aa12.4□□□□□ -0.42
MRPS28-208ENST00000521605 SSRP1Q08945 709 aaKnown RBP12.4□□□□□ -0.42
MRPS28-208ENST00000521605 RRP12Q5JTH9 1297 aaKnown RBP12.4□□□□□ -0.42
MRPS28-208ENST00000521605 FOXD4L5Q5VV16 416 aaPredicted RBP12.4□□□□□ -0.42
MRPS28-208ENST00000521605 ADHFE1Q8IWW8 467 aa12.4□□□□□ -0.42
MRPS28-208ENST00000521605 LRRC47Q8N1G4 583 aaKnown RBP12.4□□□□□ -0.42
MRPS28-208ENST00000521605 OR6J1Q8NGC5 347 aa12.4□□□□□ -0.42
MRPS28-208ENST00000521605 LEO1Q8WVC0 666 aaPredicted RBP12.4□□□□□ -0.42
MRPS28-208ENST00000521605 FOXD4L4Q8WXT5 416 aaPredicted RBP12.4□□□□□ -0.42
MRPS28-208ENST00000521605 INCENPQ9NQS7 918 aa12.4□□□□□ -0.42
MRPS28-208ENST00000521605 TOMM22Q9NS69 142 aa12.4□□□□□ -0.42
MRPS28-208ENST00000521605 NAP1L2Q9ULW6 460 aaPredicted RBP12.4□□□□□ -0.42
MRPS28-208ENST00000521605 FAM50BQ9Y247 325 aa12.4□□□□□ -0.42
MRPS28-208ENST00000521605 C19orf67A6NJJ6 358 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 PRPF3O43395 683 aaKnown RBP12.39□□□□□ -0.43
MRPS28-208ENST00000521605 YEATS4O95619 227 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 RASA1P20936 1047 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 U2AF2P26368 475 aaKnown RBP eCLIP12.39□□□□□ -0.43
MRPS28-208ENST00000521605 SMARCA1P28370 1054 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 KIF5BP33176 963 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 GNAQP50148 359 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 SNAP25P60880 206 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 FUT2Q10981 343 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 IKQ13123 557 aaPredicted RBP12.39□□□□□ -0.43
MRPS28-208ENST00000521605 CLUL1Q15846 466 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 TCTN1Q2MV58 587 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 DUSP28Q4G0W2 176 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 RCSD1Q6JBY9 416 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 NSMFQ6X4W1 530 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 NEDD1Q8NHV4 660 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 TRERF1Q96PN7 1200 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 LZTS2Q9BRK4 669 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 ALG1Q9BT22 464 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 WDR11Q9BZH6 1224 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 MKNK2Q9HBH9 465 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 SENP2Q9HC62 589 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 VTA1Q9NP79 307 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 CLDND1Q9NY35 253 aa12.39□□□□□ -0.43
MRPS28-208ENST00000521605 RTEL1Q9NZ71 1219 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms