RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 RPS6KB1P23443 525 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 FXR1P51114 621 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRIM35-204ENST00000521283 PURAQ00577 322 aaKnown RBP11.72□□□□□ -0.53
TRIM35-204ENST00000521283 BEX3Q00994 111 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 FAAP100Q0VG06 881 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 DGKDQ16760 1214 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 ADCK5Q3MIX3 580 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 NFRKBQ6P4R8 1299 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 CXCL17Q6UXB2 119 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 SEPT14Q6ZU15 432 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 CCDC12Q8WUD4 166 aaPredicted RBP11.72□□□□□ -0.53
TRIM35-204ENST00000521283 JAKMIP1Q96N16 626 aaKnown RBP11.72□□□□□ -0.53
TRIM35-204ENST00000521283 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 AGXT2Q9BYV1 514 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 DDX41Q9UJV9 622 aaKnown RBP11.72□□□□□ -0.53
TRIM35-204ENST00000521283 RANBP2P49792 3224 aaKnown RBP11.72□□□□□ -0.53
TRIM35-204ENST00000521283 LTBP2Q14767 1821 aa11.72□□□□□ -0.53
TRIM35-204ENST00000521283 NID2Q14112 1375 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 SCN10AQ9Y5Y9 1956 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 KLF18A0A0U1RQI7 1052 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 SPDYE3A6NKU9 549 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 GOLGA8AA7E2F4 631 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 GOLGA8BA8MQT2 603 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 PPFIA4O75335 1185 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 PLEKHA8P1O95397 391 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 CD4P01730 458 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 MYCLP12524 364 aaPredicted RBP11.71□□□□□ -0.53
TRIM35-204ENST00000521283 ICAM3P32942 547 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 METAP2P50579 478 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRIM35-204ENST00000521283 EVCP57679 992 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 ANAPC15P60006 121 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 MDM2Q00987 491 aaPredicted RBP11.71□□□□□ -0.53
TRIM35-204ENST00000521283 PPIGQ13427 754 aaKnown RBP eCLIP11.71□□□□□ -0.532e-11■■■■□ 24.1
TRIM35-204ENST00000521283 NEDD9Q14511 834 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 SLC35G1Q2M3R5 365 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 PCNX4Q63HM2 1172 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 Q6ZUG5 572 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 RUFY3Q7L099 469 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 NLRX1Q86UT6 975 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 FCHSD1Q86WN1 690 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 FAM126BQ8IXS8 530 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 DHX37Q8IY37 1157 aaKnown RBP11.71□□□□□ -0.53
TRIM35-204ENST00000521283 FAM177A1Q8N128 213 aaPredicted RBP11.71□□□□□ -0.53
TRIM35-204ENST00000521283 TMEM199Q8N511 208 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 PPTC7Q8NI37 304 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 SENP7Q9BQF6 1050 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 USP26Q9BXU7 913 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 LRRC2Q9BYS8 371 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 CYP46A1Q9Y6A2 500 aa11.71□□□□□ -0.53
TRIM35-204ENST00000521283 TRIM43BA6NCK2 446 aa11.7□□□□□ -0.54
TRIM35-204ENST00000521283 FIBPO43427 364 aa11.7□□□□□ -0.54
TRIM35-204ENST00000521283 MYL3P08590 195 aa11.7□□□□□ -0.54
TRIM35-204ENST00000521283 HOXA13P31271 388 aaPredicted RBP11.7□□□□□ -0.54
TRIM35-204ENST00000521283 AKAP17AQ02040 695 aaKnown RBP11.7□□□□□ -0.54
TRIM35-204ENST00000521283 FPGSQ05932 587 aa11.7□□□□□ -0.54
TRIM35-204ENST00000521283 MFSD5Q6N075 450 aa11.7□□□□□ -0.54
TRIM35-204ENST00000521283 CPLX2Q6PUV4 134 aaKnown RBP11.7□□□□□ -0.54
TRIM35-204ENST00000521283 TRIM43Q96BQ3 446 aaPredicted RBP11.7□□□□□ -0.54
TRIM35-204ENST00000521283 INPP4AQ96PE3 977 aaPredicted RBP11.7□□□□□ -0.54
TRIM35-204ENST00000521283 TBX21Q9UL17 535 aa11.7□□□□□ -0.54
TRIM35-204ENST00000521283 MEIS2O14770 477 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 PARNO95453 639 aaKnown RBP11.69□□□□□ -0.54
TRIM35-204ENST00000521283 MMP3P08254 477 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 RXRAP19793 462 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 GNA11P29992 359 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 ARHGAP1Q07960 439 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 AP3B2Q13367 1082 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 ANKRD1Q15327 319 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 LY6KQ17RY6 165 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 CELF3Q5SZQ8 465 aaKnown RBP11.69□□□□□ -0.54
TRIM35-204ENST00000521283 MYSM1Q5VVJ2 828 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 HEATR3Q7Z4Q2 680 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 SESTD1Q86VW0 696 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 RPUSD2Q8IZ73 545 aaKnown RBP11.69□□□□□ -0.54
TRIM35-204ENST00000521283 CCDC155Q8N6L0 562 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 PIBF1Q8WXW3 757 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 ZNF516Q92618 1163 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 BADQ92934 168 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 BRF1Q92994 677 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 GPRASP2Q96D09 838 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 ZNF274Q96GC6 653 aaPredicted RBP11.69□□□□□ -0.54
TRIM35-204ENST00000521283 ALDH8A1Q9H2A2 487 aaPredicted RBP11.69□□□□□ -0.54
TRIM35-204ENST00000521283 MTIF3Q9H2K0 278 aaKnown RBP11.69□□□□□ -0.54
TRIM35-204ENST00000521283 MLXIPQ9HAP2 919 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 IL21Q9HBE4 155 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 RIC8AQ9NPQ8 531 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 BARHL2Q9NY43 387 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 BRPF3Q9ULD4 1205 aa11.69□□□□□ -0.54
TRIM35-204ENST00000521283 NAP1L2Q9ULW6 460 aaPredicted RBP11.69□□□□□ -0.54
TRIM35-204ENST00000521283 V9GY48 417 aaPredicted RBP11.69□□□□□ -0.54
TRIM35-204ENST00000521283 CNTNAP5Q8WYK1 1306 aa11.68□□□□□ -0.54
TRIM35-204ENST00000521283 SPATA31C2B4DYI2 1134 aa11.68□□□□□ -0.54
TRIM35-204ENST00000521283 PRPF3O43395 683 aaKnown RBP11.68□□□□□ -0.54
TRIM35-204ENST00000521283 ARIH2O95376 493 aa11.68□□□□□ -0.54
TRIM35-204ENST00000521283 PFKMP08237 780 aa11.68□□□□□ -0.54
TRIM35-204ENST00000521283 HOXD8P13378 290 aaPredicted RBP11.68□□□□□ -0.54
TRIM35-204ENST00000521283 NAPAP54920 295 aa11.68□□□□□ -0.54
TRIM35-204ENST00000521283 PFKFB3Q16875 520 aaPredicted RBP11.68□□□□□ -0.54
TRIM35-204ENST00000521283 PSRC1Q6PGN9 363 aaPredicted RBP11.68□□□□□ -0.54
TRIM35-204ENST00000521283 USP17L6PQ6QN14 398 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms