RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 RANBP17Q9H2T7 1088 aaKnown RBP11.07□□□□□ -0.64
SPARC-202ENST00000520687 ZNF277Q9NRM2 450 aaPredicted RBP11.07□□□□□ -0.64
SPARC-202ENST00000520687 TAB2Q9NYJ8 693 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 MAP3K20Q9NYL2 800 aaKnown RBP11.07□□□□□ -0.64
SPARC-202ENST00000520687 MYO1AQ9UBC5 1043 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 CAPN11Q9UMQ6 739 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 LUC7L2Q9Y383 392 aaKnown RBP11.07□□□□□ -0.64
SPARC-202ENST00000520687 A0A1W2PRG0 241 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 GCOM1H8Y6P7 765 aaPredicted RBP11.07□□□□□ -0.64
SPARC-202ENST00000520687 GYPCP04921 128 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 POLR2MP0CAP2 368 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 FDX1P10109 184 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 RPA1P27694 616 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 CASP14P31944 242 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 ZNF280AP59817 542 aaPredicted RBP11.07□□□□□ -0.64
SPARC-202ENST00000520687 ANKRD40Q6AI12 368 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 TRIM65Q6PJ69 517 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 SYT10Q6XYQ8 523 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 MYOCDQ8IZQ8 938 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 ZNF397Q8NF99 534 aaPredicted RBP11.07□□□□□ -0.64
SPARC-202ENST00000520687 LRRC15Q8TF66 581 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 ANKRD7Q92527 254 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 LPAR1Q92633 364 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 CEP63Q96MT8 703 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 ERGIC2Q96RQ1 377 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 NUP88Q99567 741 aaPredicted RBP11.07□□□□□ -0.64
SPARC-202ENST00000520687 ZNHIT6Q9NWK9 470 aaKnown RBP11.07□□□□□ -0.64
SPARC-202ENST00000520687 DNM3Q9UQ16 869 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 MAPK8IP1Q9UQF2 711 aa11.07□□□□□ -0.64
SPARC-202ENST00000520687 POTEMA6NI47 508 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 FZD9O00144 591 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 TRPA1O75762 1119 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 PLA2G4BP0C869 781 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 ZNF76P36508 570 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 MTIF2P46199 727 aaKnown RBP11.06□□□□□ -0.64
SPARC-202ENST00000520687 CDK17Q00537 523 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 CXCL9Q07325 125 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 TBC1D8BQ0IIM8 1120 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 ZNF662Q6ZS27 426 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 DNAJC7Q99615 494 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 MAF1Q9H063 256 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 ABHD10Q9NUJ1 306 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 CGNQ9P2M7 1197 aaKnown RBP11.06□□□□□ -0.64
SPARC-202ENST00000520687 ADGRG1Q9Y653 693 aa11.06□□□□□ -0.64
SPARC-202ENST00000520687 CLRN2A0PK11 232 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 FRMD3A2A2Y4 597 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 KIF5CO60282 957 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 CASQ1P31415 396 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 KRT9P35527 623 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 PMS1P54277 932 aaKnown RBP11.05□□□□□ -0.64
SPARC-202ENST00000520687 JAG1P78504 1218 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 ZBED6P86452 979 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 FKBP3Q00688 224 aaKnown RBP11.05□□□□□ -0.64
SPARC-202ENST00000520687 RRP1BQ14684 758 aaKnown RBP11.05□□□□□ -0.64
SPARC-202ENST00000520687 MAN2A1Q16706 1144 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 PRR16Q569H4 304 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 FAM26FQ5R3K3 315 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 KRT26Q7Z3Y9 468 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 MCF2L2Q86YR7 1114 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 KIAA0895Q8NCT3 520 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 DNAJC19Q96DA6 116 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 CNOT6LQ96LI5 555 aaKnown RBP11.05□□□□□ -0.64
SPARC-202ENST00000520687 NOC4LQ9BVI4 516 aaKnown RBP11.05□□□□□ -0.64
SPARC-202ENST00000520687 VEZTQ9HBM0 779 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 TUFT1Q9NNX1 390 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 MYOZ2Q9NPC6 264 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 PANK4Q9NVE7 773 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 RNF186Q9NXI6 227 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 PGAP2Q9UHJ9 254 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 DNAI1Q9UI46 699 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 KIAA1024Q9UPX6 916 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 COL4A5P29400 1685 aa11.05□□□□□ -0.64
SPARC-202ENST00000520687 TRIM49BA6NDI0 452 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 WDR46O15213 610 aaKnown RBP11.04□□□□□ -0.64
SPARC-202ENST00000520687 FCER1AP12319 257 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 IDEP14735 1019 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 KRT83P78385 493 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 SETQ01105 290 aaPredicted RBP11.04□□□□□ -0.64
SPARC-202ENST00000520687 GHRHRQ02643 423 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 PPP2R3AQ06190 1150 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 COASYQ13057 564 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 EDRF1Q3B7T1 1238 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 FBXO46Q6PJ61 603 aaPredicted RBP11.04□□□□□ -0.64
SPARC-202ENST00000520687 NIPA1Q7RTP0 329 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 CCDC170Q8IYT3 715 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 SYT2Q8N9I0 419 aaPredicted RBP11.04□□□□□ -0.64
SPARC-202ENST00000520687 CPLX3Q8WVH0 158 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 LENG9Q96B70 501 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 WDR11Q9BZH6 1224 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 NUCKS1Q9H1E3 243 aaKnown RBP11.04□□□□□ -0.64
SPARC-202ENST00000520687 SEMA6BQ9H3T3 888 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 SLC39A2Q9NP94 309 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 PRDM4Q9UKN5 801 aa11.04□□□□□ -0.64
SPARC-202ENST00000520687 CTNND1O60716 968 aaKnown RBP11.03□□□□□ -0.64
SPARC-202ENST00000520687 GAP43P17677 238 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 MARSP56192 900 aaKnown RBP11.03□□□□□ -0.64
SPARC-202ENST00000520687 GNG11P61952 73 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 SPIRE1Q08AE8 756 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 MEA1Q16626 185 aa11.03□□□□□ -0.64
SPARC-202ENST00000520687 SHROOM1Q2M3G4 852 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms