RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 NOX5Q96PH1 765 aa5.94□□□□□ -1.46
SQLE-204ENST00000520493 GORASP1Q9BQQ3 440 aa5.94□□□□□ -1.46
SQLE-204ENST00000520493 C11orf84Q9BUA3 381 aaPredicted RBP5.94□□□□□ -1.46
SQLE-204ENST00000520493 PHF20Q9BVI0 1012 aa5.94□□□□□ -1.46
SQLE-204ENST00000520493 MRIQ9BWK5 157 aa5.94□□□□□ -1.46
SQLE-204ENST00000520493 PIF1Q9H611 641 aa5.94□□□□□ -1.46
SQLE-204ENST00000520493 FBXL7Q9UJT9 491 aa5.94□□□□□ -1.46
SQLE-204ENST00000520493 ARNTLO00327 626 aa5.93□□□□□ -1.46
SQLE-204ENST00000520493 DLX3O60479 287 aa5.93□□□□□ -1.46
SQLE-204ENST00000520493 IFRD2Q12894 506 aaPredicted RBP5.93□□□□□ -1.46
SQLE-204ENST00000520493 EMC4Q5J8M3 183 aa5.93□□□□□ -1.46
SQLE-204ENST00000520493 SDE2Q6IQ49 451 aa5.93□□□□□ -1.46
SQLE-204ENST00000520493 NSMFQ6X4W1 530 aa5.93□□□□□ -1.46
SQLE-204ENST00000520493 DCAF4Q8WV16 495 aa5.93□□□□□ -1.46
SQLE-204ENST00000520493 TOE1Q96GM8 510 aaKnown RBP5.93□□□□□ -1.46
SQLE-204ENST00000520493 ZFYVE21Q9BQ24 234 aa5.93□□□□□ -1.46
SQLE-204ENST00000520493 CCDC113Q9H0I3 377 aa5.93□□□□□ -1.46
SQLE-204ENST00000520493 NUB1Q9Y5A7 615 aa5.93□□□□□ -1.46
SQLE-204ENST00000520493 CAPNS1P04632 268 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 PABPC1P11940 636 aaKnown RBP5.92□□□□□ -1.46
SQLE-204ENST00000520493 THBS2P35442 1172 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 STAT5AP42229 794 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 DLX2Q07687 328 aaPredicted RBP5.92□□□□□ -1.46
SQLE-204ENST00000520493 KIZQ2M2Z5 673 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 UBXN11Q5T124 520 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 CYP4F22Q6NT55 531 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 FAM124AQ86V42 546 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 TRIM48Q8IWZ4 208 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 FAM26EQ8N5C1 309 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.92□□□□□ -1.46
SQLE-204ENST00000520493 IPO9Q96P70 1041 aaKnown RBP5.92□□□□□ -1.46
SQLE-204ENST00000520493 TMX1Q9H3N1 280 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 DTLQ9NZJ0 730 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 MYOTQ9UBF9 498 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 MSRB2Q9Y3D2 182 aa5.92□□□□□ -1.46
SQLE-204ENST00000520493 CYP7B1O75881 506 aa5.91□□□□□ -1.46
SQLE-204ENST00000520493 CLSTN1O94985 981 aa5.91□□□□□ -1.46
SQLE-204ENST00000520493 RPL13P26373 211 aaKnown RBP5.91□□□□□ -1.46
SQLE-204ENST00000520493 HSD3B2P26439 372 aa5.91□□□□□ -1.46
SQLE-204ENST00000520493 MAGEA10P43363 369 aaPredicted RBP5.91□□□□□ -1.46
SQLE-204ENST00000520493 ITGA1P56199 1179 aa5.91□□□□□ -1.46
SQLE-204ENST00000520493 BMS1Q14692 1282 aaKnown RBP5.91□□□□□ -1.46
SQLE-204ENST00000520493 MTERF2Q49AM1 385 aa5.91□□□□□ -1.46
SQLE-204ENST00000520493 WRNIP1Q96S55 665 aa5.91□□□□□ -1.46
SQLE-204ENST00000520493 SMOC1Q9H4F8 434 aa5.91□□□□□ -1.46
SQLE-204ENST00000520493 ARHGEF4Q9NR80 690 aa5.91□□□□□ -1.46
SQLE-204ENST00000520493 SPATA6Q9NWH7 488 aaPredicted RBP5.91□□□□□ -1.46
SQLE-204ENST00000520493 TCRBV5S2A0A599 114 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 CCDC85CA6NKD9 419 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 PDPK1O15530 556 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 TADA3O75528 432 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 GRK2P25098 689 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 GRK3P35626 688 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 ADAM17P78536 824 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 SPIRE1Q08AE8 756 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 CRB2Q5IJ48 1285 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 EGFLAMQ63HQ2 1017 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 ZNF761Q86XN6 746 aaPredicted RBP5.9□□□□□ -1.46
SQLE-204ENST00000520493 IFNL3Q8IZI9 196 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.9□□□□□ -1.46
SQLE-204ENST00000520493 ADAMTS17Q8TE56 1095 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 CLIC6Q96NY7 704 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 SRPK1Q96SB4 655 aaKnown RBP5.9□□□□□ -1.46
SQLE-204ENST00000520493 CDC6Q99741 560 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 ALG1Q9BT22 464 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 SPATA9Q9BWV2 254 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 SLITRK6Q9H5Y7 841 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 SLC6A20Q9NP91 592 aa5.9□□□□□ -1.46
SQLE-204ENST00000520493 ENPP3O14638 875 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 NOBOXO60393 691 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 APPP05067 770 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 GNAT1P11488 350 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 GPR85P60893 370 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 KIAA2012Q0VF49 1180 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 RASGRF1Q13972 1273 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 RASA3Q14644 834 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 CR1LQ2VPA4 569 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 FAM26FQ5R3K3 315 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 ZFYVE27Q5T4F4 411 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 PRAMEF18Q5VWM3 479 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 STYK1Q6J9G0 422 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 BORAQ6PGQ7 559 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 LBX2Q6XYB7 198 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 ARRDC4Q8NCT1 418 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 OSBP2Q969R2 916 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 DEPDC7Q96QD5 511 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 TMEM209Q96SK2 561 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 JAM3Q9BX67 310 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 WDR26Q9H7D7 661 aa5.89□□□□□ -1.47
SQLE-204ENST00000520493 CNOT11Q9UKZ1 510 aaKnown RBP5.89□□□□□ -1.47
SQLE-204ENST00000520493 MSCO60682 206 aa5.88□□□□□ -1.47
SQLE-204ENST00000520493 SSRP1Q08945 709 aaKnown RBP5.88□□□□□ -1.47
SQLE-204ENST00000520493 RGL3Q3MIN7 710 aa5.88□□□□□ -1.47
SQLE-204ENST00000520493 TEPPQ6URK8 271 aa5.88□□□□□ -1.47
SQLE-204ENST00000520493 STK32CQ86UX6 486 aa5.88□□□□□ -1.47
SQLE-204ENST00000520493 SCUBE1Q8IWY4 988 aa5.88□□□□□ -1.47
SQLE-204ENST00000520493 PIP4K2CQ8TBX8 421 aa5.88□□□□□ -1.47
SQLE-204ENST00000520493 SNTG2Q9NY99 539 aa5.88□□□□□ -1.47
SQLE-204ENST00000520493 ASH2LQ9UBL3 628 aa5.88□□□□□ -1.47
SQLE-204ENST00000520493 ANKRD62A6NC57 917 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms