RNA–Protein interactions for RNA: ENST00000520177.5

G3BP1-208, Transcript of G3BP stress granule assembly factor 1, humanhuman

TSL 1 (best)

Gene G3BP1, Length 2,700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-208ENST00000520177 CCDC114Q96M63 670 aa16.38■□□□□ 0.21
G3BP1-208ENST00000520177 MKNK2Q9HBH9 465 aa16.38■□□□□ 0.21
G3BP1-208ENST00000520177 LUC7LQ9NQ29 371 aaKnown RBP16.38■□□□□ 0.21
G3BP1-208ENST00000520177 DDX20Q9UHI6 824 aaKnown RBP16.38■□□□□ 0.21
G3BP1-208ENST00000520177 MINPP1Q9UNW1 487 aa16.38■□□□□ 0.21
G3BP1-208ENST00000520177 MYH7BA7E2Y1 1941 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 GMNCA6NCL1 334 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 KLRF2D3W0D1 207 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 ECHS1P30084 290 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 SLC18A3Q16572 532 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 QPCTQ16769 361 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 SLC44A5Q8NCS7 719 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 ISCUQ9H1K1 167 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 TFCP2L1Q9NZI6 479 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 BIN2Q9UBW5 565 aaPredicted RBP16.37■□□□□ 0.21
G3BP1-208ENST00000520177 GGA2Q9UJY4 613 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 H0YGN5 161 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 TRAF5O00463 557 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 TSPY3P0CV98 308 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 TSPY8P0CW00 308 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 MYBP10242 640 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 CTNNA1P35221 906 aaKnown RBP16.37■□□□□ 0.21
G3BP1-208ENST00000520177 ARFGAP2Q8N6H7 521 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 TAF4BQ92750 862 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 TSG101Q99816 390 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 NFS1Q9Y697 457 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
G3BP1-208ENST00000520177 PALM3A6NDB9 673 aaPredicted RBP16.36■□□□□ 0.21
G3BP1-208ENST00000520177 SSBP05455 408 aaKnown RBP eCLIP16.36■□□□□ 0.21
G3BP1-208ENST00000520177 ZNF844Q08AG5 666 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 ODF2Q5BJF6 829 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 FAM133AQ8N9E0 248 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 DDX12PQ92771 950 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 NUDT12Q9BQG2 462 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 TMEM47Q9BQJ4 181 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 OSBPL7Q9BZF2 842 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 VAT1LQ9HCJ6 419 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 SLC12A6Q9UHW9 1150 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 TMEM59LQ9UK28 342 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 COL4A3BPQ9Y5P4 624 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 POTEMA6NI47 508 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 DNM1LO00429 736 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 CDR1P51861 262 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 KLHL30Q0D2K2 578 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 PLCB4Q15147 1175 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 C12orf60Q5U649 245 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 LRIG3Q6UXM1 1119 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 PAXIP1Q6ZW49 1069 aaPredicted RBP16.36■□□□□ 0.21
G3BP1-208ENST00000520177 KCNK18Q7Z418 384 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 DNAAF5Q86Y56 855 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 ANKS1AQ92625 1134 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 AP1M1Q9BXS5 423 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 NEUROG2Q9H2A3 272 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 C6orf50Q9HD87 102 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 CCDC87Q9NVE4 849 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 TMEM260Q9NX78 707 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 STK17AQ9UEE5 414 aa16.36■□□□□ 0.21
G3BP1-208ENST00000520177 GOLGA6L7A0A1B0GV03 622 aa16.35■□□□□ 0.21
G3BP1-208ENST00000520177 SRRM3A6NNA2 597 aaPredicted RBP16.35■□□□□ 0.21
G3BP1-208ENST00000520177 CRKLP46109 303 aaKnown RBP16.35■□□□□ 0.21
G3BP1-208ENST00000520177 RPS6KA1Q15418 735 aa16.35■□□□□ 0.21
G3BP1-208ENST00000520177 FBXO33Q7Z6M2 555 aa16.35■□□□□ 0.21
G3BP1-208ENST00000520177 SYN2Q92777 582 aaPredicted RBP16.35■□□□□ 0.21
G3BP1-208ENST00000520177 NUCKS1Q9H1E3 243 aaKnown RBP16.35■□□□□ 0.21
G3BP1-208ENST00000520177 TRAPPC3O43617 180 aa16.35■□□□□ 0.21
G3BP1-208ENST00000520177 CEP104O60308 925 aa16.35■□□□□ 0.21
G3BP1-208ENST00000520177 FLT3P36888 993 aa16.35■□□□□ 0.21
G3BP1-208ENST00000520177 GIMAP7Q8NHV1 300 aa16.35■□□□□ 0.21
G3BP1-208ENST00000520177 UBLCP1Q8WVY7 318 aaPredicted RBP16.35■□□□□ 0.21
G3BP1-208ENST00000520177 BSDC1Q9NW68 430 aaPredicted RBP16.35■□□□□ 0.21
G3BP1-208ENST00000520177 TBC1D7Q9P0N9 293 aa16.35■□□□□ 0.21
G3BP1-208ENST00000520177 CNOT8Q9UFF9 292 aaKnown RBP16.35■□□□□ 0.21
G3BP1-208ENST00000520177 ATP2C2O75185 946 aa16.34■□□□□ 0.21
G3BP1-208ENST00000520177 FKBP3Q00688 224 aaKnown RBP16.34■□□□□ 0.21
G3BP1-208ENST00000520177 DRP2Q13474 957 aa16.34■□□□□ 0.21
G3BP1-208ENST00000520177 CALCRLQ16602 461 aa16.34■□□□□ 0.21
G3BP1-208ENST00000520177 MYOCDQ8IZQ8 938 aa16.34■□□□□ 0.21
G3BP1-208ENST00000520177 RAD54LQ92698 747 aa16.34■□□□□ 0.21
G3BP1-208ENST00000520177 DDX47Q9H0S4 455 aaKnown RBP16.34■□□□□ 0.21
G3BP1-208ENST00000520177 RIC8AQ9NPQ8 531 aa16.34■□□□□ 0.21
G3BP1-208ENST00000520177 PDHBP11177 359 aa16.34■□□□□ 0.21
G3BP1-208ENST00000520177 GNA11P29992 359 aa16.34■□□□□ 0.21
G3BP1-208ENST00000520177 ERFEQ4G0M1 354 aa16.34■□□□□ 0.21
G3BP1-208ENST00000520177 CELF1Q92879 486 aaKnown RBP16.34■□□□□ 0.21
G3BP1-208ENST00000520177 LRRC45Q96CN5 670 aa16.34■□□□□ 0.21
G3BP1-208ENST00000520177 FBXL5Q9UKA1 691 aa16.34■□□□□ 0.21
G3BP1-208ENST00000520177 LEMD3Q9Y2U8 911 aa16.34■□□□□ 0.21
G3BP1-208ENST00000520177 DCDC2CA8MYV0 355 aa16.33■□□□□ 0.21
G3BP1-208ENST00000520177 SART1O43290 800 aaKnown RBP16.33■□□□□ 0.21
G3BP1-208ENST00000520177 SLC37A4O43826 429 aa16.33■□□□□ 0.21
G3BP1-208ENST00000520177 CUL1Q13616 776 aa16.33■□□□□ 0.21
G3BP1-208ENST00000520177 PREPLQ4J6C6 727 aaPredicted RBP16.33■□□□□ 0.21
G3BP1-208ENST00000520177 SOGA3Q5TF21 947 aa16.33■□□□□ 0.21
G3BP1-208ENST00000520177 USP17L2Q6R6M4 530 aa16.33■□□□□ 0.21
G3BP1-208ENST00000520177 ZNF444Q8N0Y2 327 aaPredicted RBP16.33■□□□□ 0.21
G3BP1-208ENST00000520177 SNX29Q8TEQ0 813 aa16.33■□□□□ 0.21
G3BP1-208ENST00000520177 SEC16BQ96JE7 1060 aa16.33■□□□□ 0.21
G3BP1-208ENST00000520177 MTMR9Q96QG7 549 aa16.33■□□□□ 0.21
G3BP1-208ENST00000520177 FGFBP2Q9BYJ0 223 aa16.33■□□□□ 0.21
G3BP1-208ENST00000520177 HAUS2Q9NVX0 235 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms