RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 RMDN3Q96TC7 470 aa10.07□□□□□ -0.8
PABPC1-213ENST00000519848 LRRC2Q9BYS8 371 aa10.07□□□□□ -0.8
PABPC1-213ENST00000519848 HDAC6Q9UBN7 1215 aa10.07□□□□□ -0.8
PABPC1-213ENST00000519848 XIRP2A4UGR9 3374 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 TMEM265A0A087WTH1 108 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 LOC102724159A0A0B4J2E5 919 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 ZBTB5O15062 677 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 F2P00734 622 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 FGBP02675 491 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 IQCF3P0C7M6 154 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 MFAP1P55081 439 aaKnown RBP10.06□□□□□ -0.8
PABPC1-213ENST00000519848 CHMP4BP1P59074 171 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 PWP2Q15269 919 aaKnown RBP10.06□□□□□ -0.8
PABPC1-213ENST00000519848 FAM47CQ5HY64 1035 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 TYW1BQ6NUM6 668 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 TCEANC2Q96MN5 208 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 UBAC1Q9BSL1 405 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 C16orf70Q9BSU1 422 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 KRT23Q9C075 422 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 CERS4Q9HA82 394 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 POLR3EQ9NVU0 708 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 TRANK1O15050 2925 aa10.06□□□□□ -0.8
PABPC1-213ENST00000519848 HIP1O00291 1037 aa10.05□□□□□ -0.8
PABPC1-213ENST00000519848 SH2B2O14492 632 aaPredicted RBP10.05□□□□□ -0.8
PABPC1-213ENST00000519848 IFIT3O14879 490 aaKnown RBP10.05□□□□□ -0.8
PABPC1-213ENST00000519848 SLC27A2O14975 620 aa10.05□□□□□ -0.8
PABPC1-213ENST00000519848 DHX16O60231 1041 aaKnown RBP10.05□□□□□ -0.8
PABPC1-213ENST00000519848 CA3P07451 260 aa10.05□□□□□ -0.8
PABPC1-213ENST00000519848 CPT1AP50416 773 aa10.05□□□□□ -0.8
PABPC1-213ENST00000519848 HS6ST3Q8IZP7 471 aa10.05□□□□□ -0.8
PABPC1-213ENST00000519848 SRBD1Q8N5C6 995 aaKnown RBP10.05□□□□□ -0.8
PABPC1-213ENST00000519848 NSUN6Q8TEA1 469 aaKnown RBP10.05□□□□□ -0.8
PABPC1-213ENST00000519848 ZBTB10Q96DT7 871 aa10.05□□□□□ -0.8
PABPC1-213ENST00000519848 AMNQ9BXJ7 453 aa10.05□□□□□ -0.8
PABPC1-213ENST00000519848 GTF2IRD1Q9UHL9 959 aa10.05□□□□□ -0.8
PABPC1-213ENST00000519848 PCDHA1Q9Y5I3 950 aa10.05□□□□□ -0.8
PABPC1-213ENST00000519848 MEIS2O14770 477 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 NKRFO15226 690 aaKnown RBP eCLIP10.04□□□□□ -0.8
PABPC1-213ENST00000519848 LPXNO60711 386 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 GGPS1O95749 300 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 GH1P01241 217 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 MYCLP12524 364 aaPredicted RBP10.04□□□□□ -0.8
PABPC1-213ENST00000519848 HOXC8P31273 242 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 RBL2Q08999 1139 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 CCDC85BQ15834 202 aaPredicted RBP10.04□□□□□ -0.8
PABPC1-213ENST00000519848 ADCK5Q3MIX3 580 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 ARHGEF16Q5VV41 709 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 MYSM1Q5VVJ2 828 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 NFRKBQ6P4R8 1299 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 USP17L6PQ6QN14 398 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 VSIG10LQ86VR7 867 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 SESTD1Q86VW0 696 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 FCHSD1Q86WN1 690 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 ZNF654Q8IZM8 581 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 PPM1EQ8WY54 764 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 EMID1Q96A84 441 aaPredicted RBP10.04□□□□□ -0.8
PABPC1-213ENST00000519848 NECAB3Q96P71 396 aaPredicted RBP10.04□□□□□ -0.8
PABPC1-213ENST00000519848 ESYT1Q9BSJ8 1104 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 ALG1Q9BT22 464 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 CNNM2Q9H8M5 875 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 CTNNA3Q9UI47 895 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 KIAA1671Q9BY89 1806 aa10.04□□□□□ -0.8
PABPC1-213ENST00000519848 TCF20Q9UGU0 1960 aaKnown RBP10.04□□□□□ -0.8
PABPC1-213ENST00000519848 PRRC2BQ5JSZ5 2229 aaKnown RBP10.03□□□□□ -0.8
PABPC1-213ENST00000519848 ZBBXA8MT70 800 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 PRC1O43663 620 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 CKBP12277 381 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 ATP2A2P16615 1042 aaKnown RBP10.03□□□□□ -0.8
PABPC1-213ENST00000519848 TAP1Q03518 808 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 FUT2Q10981 343 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 MFSD10Q14728 455 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 WTAPQ15007 396 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 NECTIN1Q15223 517 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 STXBP2Q15833 593 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 PTGISQ16647 500 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 UBE2SQ16763 222 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 TMEM67Q5HYA8 995 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 CELF3Q5SZQ8 465 aaKnown RBP10.03□□□□□ -0.8
PABPC1-213ENST00000519848 PPTC7Q8NI37 304 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 INPP4AQ96PE3 977 aaPredicted RBP10.03□□□□□ -0.8
PABPC1-213ENST00000519848 MRPL11Q9Y3B7 192 aaKnown RBP10.03□□□□□ -0.8
PABPC1-213ENST00000519848 CUL9Q8IWT3 2517 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 CNTNAP5Q8WYK1 1306 aa10.03□□□□□ -0.8
PABPC1-213ENST00000519848 MYO9BQ13459 2157 aa10.02□□□□□ -0.8
PABPC1-213ENST00000519848 NLRC5Q86WI3 1866 aa10.02□□□□□ -0.8
PABPC1-213ENST00000519848 ZEB2O60315 1214 aa10.02□□□□□ -0.81
PABPC1-213ENST00000519848 ATP9AO75110 1047 aa10.02□□□□□ -0.81
PABPC1-213ENST00000519848 LGR5O75473 907 aa10.02□□□□□ -0.81
PABPC1-213ENST00000519848 CPA1P15085 419 aa10.02□□□□□ -0.81
PABPC1-213ENST00000519848 WDR5P61964 334 aaKnown RBP10.02□□□□□ -0.81
PABPC1-213ENST00000519848 TFF2Q03403 129 aa10.02□□□□□ -0.81
PABPC1-213ENST00000519848 KIAA0753Q2KHM9 967 aa10.02□□□□□ -0.81
PABPC1-213ENST00000519848 ZNF618Q5T7W0 954 aa10.02□□□□□ -0.81
PABPC1-213ENST00000519848 CREB3L3Q68CJ9 461 aa10.02□□□□□ -0.81
PABPC1-213ENST00000519848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.02□□□□□ -0.81
PABPC1-213ENST00000519848 LRRC8DQ7L1W4 858 aa10.02□□□□□ -0.81
PABPC1-213ENST00000519848 NCOA7Q8NI08 942 aa10.02□□□□□ -0.81
PABPC1-213ENST00000519848 PGBD1Q96JS3 809 aa10.02□□□□□ -0.81
PABPC1-213ENST00000519848 IWS1Q96ST2 819 aa10.02□□□□□ -0.81
PABPC1-213ENST00000519848 SPZ1Q9BXG8 430 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms