RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 LACRTQ9GZZ8 138 aa9.28□□□□□ -0.92
PCM1-212ENST00000519253 NDC80O14777 642 aa9.27□□□□□ -0.92
PCM1-212ENST00000519253 HGSO14964 777 aaPredicted RBP9.27□□□□□ -0.92
PCM1-212ENST00000519253 CSF1RP07333 972 aa9.27□□□□□ -0.92
PCM1-212ENST00000519253 ATP2A2P16615 1042 aaKnown RBP9.27□□□□□ -0.92
PCM1-212ENST00000519253 IL6STP40189 918 aaPredicted RBP9.27□□□□□ -0.92
PCM1-212ENST00000519253 SLC1A4P43007 532 aa9.27□□□□□ -0.92
PCM1-212ENST00000519253 MYCBPAPQ8TBZ2 947 aa9.27□□□□□ -0.92
PCM1-212ENST00000519253 GRK7Q8WTQ7 553 aa9.27□□□□□ -0.92
PCM1-212ENST00000519253 SAAL1Q96ER3 474 aa9.27□□□□□ -0.92
PCM1-212ENST00000519253 GPCPD1Q9NPB8 672 aa9.27□□□□□ -0.92
PCM1-212ENST00000519253 TXLNGQ9NUQ3 528 aa9.27□□□□□ -0.92
PCM1-212ENST00000519253 IFT172Q9UG01 1749 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 DESP17661 470 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 CARSP49589 748 aaKnown RBP9.27□□□□□ -0.93
PCM1-212ENST00000519253 BYSLQ13895 437 aaKnown RBP9.27□□□□□ -0.93
PCM1-212ENST00000519253 ARHGEF18Q6ZSZ5 1173 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 AENQ8WTP8 325 aaKnown RBP9.27□□□□□ -0.93
PCM1-212ENST00000519253 RPGRQ92834 1020 aaKnown RBP9.27□□□□□ -0.93
PCM1-212ENST00000519253 SLC40A1Q9NP59 571 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 CD2APQ9Y5K6 639 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 XDHP47989 1333 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 GCNT3O95395 438 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 HERVK_113P62684 666 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 DYNLL1P63167 89 aaKnown RBP9.27□□□□□ -0.93
PCM1-212ENST00000519253 MXRA7P84157 204 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 MUM1Q2TAK8 710 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 BBOF1Q8ND07 529 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 ARHGEF2Q92974 986 aaKnown RBP9.27□□□□□ -0.93
PCM1-212ENST00000519253 ARL8AQ96BM9 186 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 ELAC2Q9BQ52 826 aaKnown RBP9.27□□□□□ -0.93
PCM1-212ENST00000519253 FBXL5Q9UKA1 691 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 IL9RQ01113 521 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 TEX2Q8IWB9 1127 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.27□□□□□ -0.93
PCM1-212ENST00000519253 CALR3Q96L12 384 aaKnown RBP9.27□□□□□ -0.93
PCM1-212ENST00000519253 SYF2O95926 243 aaKnown RBP9.27□□□□□ -0.93
PCM1-212ENST00000519253 MAN1A1P33908 653 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 RBM5P52756 815 aaKnown RBP eCLIP9.27□□□□□ -0.93
PCM1-212ENST00000519253 SEC24CP53992 1094 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 UHMK1Q8TAS1 419 aaKnown RBP9.27□□□□□ -0.93
PCM1-212ENST00000519253 HOMER2Q9NSB8 354 aa9.27□□□□□ -0.93
PCM1-212ENST00000519253 SAP30BPQ9UHR5 308 aaKnown RBP9.27□□□□□ -0.93
PCM1-212ENST00000519253 PODXLO00592 558 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 EXOC3O60645 756 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 CIB2O75838 187 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 CPP00450 1065 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 FGGP02679 453 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 EEF2P13639 858 aaKnown RBP9.26□□□□□ -0.93
PCM1-212ENST00000519253 MYO1EQ12965 1108 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 VPS52Q8N1B4 723 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 C7orf25Q9BPX7 421 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 EMILIN3Q9NT22 766 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 TROVE2P10155 538 aaKnown RBP eCLIP9.26□□□□□ -0.931e-7■□□□□ 9.3
PCM1-212ENST00000519253 KRT15P19012 456 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 ANXA13P27216 316 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 ZNF131P52739 623 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 SLC18A3Q16572 532 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 TXNRD1Q16881 649 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 SLFN12Q8IYM2 578 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 ISCUQ9H1K1 167 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 VCPKMTQ9H867 229 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 EPB41L4AQ9HCS5 686 aaPredicted RBP9.26□□□□□ -0.93
PCM1-212ENST00000519253 DDX25Q9UHL0 483 aaKnown RBP9.26□□□□□ -0.93
PCM1-212ENST00000519253 CLTCQ00610 1675 aaKnown RBP9.26□□□□□ -0.93
PCM1-212ENST00000519253 AGLP35573 1532 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 CYP2D7A0A087X1C5 515 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 ORC4O43929 436 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 GOLGA8HP0CJ92 632 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 PLCB3Q01970 1234 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 TAF11Q15544 211 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 TRIM68Q6AZZ1 485 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 PHLDB3Q6NSJ2 640 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 CCDC62Q6P9F0 684 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 PPP1R21Q6ZMI0 780 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 SH3RF1Q7Z6J0 888 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 CCDC13Q8IYE1 715 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 MXD3Q9BW11 206 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 DDX47Q9H0S4 455 aaKnown RBP9.26□□□□□ -0.93
PCM1-212ENST00000519253 DONSONQ9NYP3 566 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 PREX1Q8TCU6 1659 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 FSBPO95073 299 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 ADAT2Q7Z6V5 191 aaKnown RBP9.26□□□□□ -0.93
PCM1-212ENST00000519253 YTHDF3Q7Z739 585 aaKnown RBP9.26□□□□□ -0.93
PCM1-212ENST00000519253 ANKRD35Q8N283 1001 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 SEC16BQ96JE7 1060 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 ABCB11O95342 1321 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 FAM187AA6NFU0 413 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 SRRM3A6NNA2 597 aaPredicted RBP9.26□□□□□ -0.93
PCM1-212ENST00000519253 THAP12O43422 761 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 RPS8P62241 208 aaKnown RBP9.26□□□□□ -0.93
PCM1-212ENST00000519253 AMPD2Q01433 879 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 ZNF662Q6ZS27 426 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 ARMC2Q8NEN0 867 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 UBXN6Q9BZV1 441 aa9.26□□□□□ -0.93
PCM1-212ENST00000519253 C6orf229H3BNL8 230 aa9.25□□□□□ -0.93
PCM1-212ENST00000519253 RNASELQ05823 741 aaKnown RBP9.25□□□□□ -0.93
PCM1-212ENST00000519253 PPP1R14CQ8TAE6 165 aa9.25□□□□□ -0.93
PCM1-212ENST00000519253 TGFBRAP1Q8WUH2 860 aa9.25□□□□□ -0.93
PCM1-212ENST00000519253 SYN2Q92777 582 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms