RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 GABREP78334 506 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 MINDY4Q4G0A6 757 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 DNTTIP2Q5QJE6 756 aaKnown RBP8.6□□□□□ -1.03
CLK4-202ENST00000519132 FSTL4Q6MZW2 842 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 PSAPL1Q6NUJ1 521 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 SLFN12Q8IYM2 578 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 PTPRN2Q92932 1015 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 TMEM87BQ96K49 555 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 ELAC2Q9BQ52 826 aaKnown RBP8.6□□□□□ -1.03
CLK4-202ENST00000519132 PRDM11Q9NQV5 511 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 SLC6A14Q9UN76 642 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 KCNK3O14649 394 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 LTFP02788 710 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 POU4F3Q15319 338 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 FIGNL1Q6PIW4 674 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 NME9Q86XW9 330 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 MCATQ8IVS2 390 aaKnown RBP8.6□□□□□ -1.03
CLK4-202ENST00000519132 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.6□□□□□ -1.03
CLK4-202ENST00000519132 POF1BQ8WVV4 589 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 FAXDC2Q96IV6 333 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 ORAI2Q96SN7 254 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 ACO2Q99798 780 aaKnown RBP8.6□□□□□ -1.03
CLK4-202ENST00000519132 TMEFF2Q9UIK5 374 aaPredicted RBP8.6□□□□□ -1.03
CLK4-202ENST00000519132 CLEC3AO75596 197 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 POU5F1BQ06416 359 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 PRAMEF13Q5VWM6 474 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 COG3Q96JB2 828 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 ADAM19Q9H013 955 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 DISC1Q9NRI5 854 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 PNPLA6Q8IY17 1366 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 CRYBG1Q9Y4K1 1723 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 COL3A1P02461 1466 aaPredicted RBP8.59□□□□□ -1.03
CLK4-202ENST00000519132 PXDNQ92626 1479 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 E2F8A0AVK6 867 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 ATP2A2P16615 1042 aaKnown RBP8.59□□□□□ -1.03
CLK4-202ENST00000519132 C8orf86Q6ZUL3 223 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 ZDHHC15Q96MV8 337 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 WDR18Q9BV38 432 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 RSAD1Q9HA92 442 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 SBNO1A3KN83 1393 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 CDK12Q9NYV4 1490 aaPredicted RBP8.59□□□□□ -1.03
CLK4-202ENST00000519132 SLIT3O75094 1523 aa8.59□□□□□ -1.03
CLK4-202ENST00000519132 CFAP69A5D8W1 941 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 H3BRJ5 948 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 IL33O95760 270 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 SNRPB2P08579 225 aaKnown RBP8.58□□□□□ -1.04
CLK4-202ENST00000519132 GBP1P32455 592 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 RENBPP51606 427 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 MAP2K1Q02750 393 aaPredicted RBP8.58□□□□□ -1.04
CLK4-202ENST00000519132 RING1Q06587 406 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 PDE4BQ07343 736 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 CXorf57Q6NSI4 855 aaKnown RBP8.58□□□□□ -1.04
CLK4-202ENST00000519132 NBPF5PQ86XG9 351 aaPredicted RBP8.58□□□□□ -1.04
CLK4-202ENST00000519132 TRIM59Q8IWR1 403 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 ZNF837Q96EG3 531 aaPredicted RBP8.58□□□□□ -1.04
CLK4-202ENST00000519132 MCMBPQ9BTE3 642 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 NGRNQ9NPE2 291 aaKnown RBP8.58□□□□□ -1.04
CLK4-202ENST00000519132 TOPORSQ9NS56 1045 aaPredicted RBP8.58□□□□□ -1.04
CLK4-202ENST00000519132 MED1Q15648 1581 aaPredicted RBP8.58□□□□□ -1.04
CLK4-202ENST00000519132 RGS13O14921 159 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 LCP1P13796 627 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 FGFR3P22607 806 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 SLC20A2Q08357 652 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 CISD2Q8N5K1 135 aaKnown RBP8.58□□□□□ -1.04
CLK4-202ENST00000519132 ENAHQ8N8S7 591 aaPredicted RBP8.58□□□□□ -1.04
CLK4-202ENST00000519132 PPP1R35Q8TAP8 253 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 PPP1R9AQ9ULJ8 1098 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 EDARQ9UNE0 448 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 EMC9Q9Y3B6 208 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 SNCAIPQ9Y6H5 919 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 NPHP3Q7Z494 1330 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 LTN1O94822 1766 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 KIF24Q5T7B8 1368 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 ADAM11O75078 769 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 ADCY1Q08828 1119 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 ZBTB34Q8NCN2 500 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 TAAR9Q96RI9 348 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 CYP26B1Q9NR63 512 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 GTF2IRD1Q9UHL9 959 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 PPP2R3BQ9Y5P8 575 aa8.58□□□□□ -1.04
CLK4-202ENST00000519132 ZNF445P59923 1031 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 AP3B2Q13367 1082 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 B3GNT9Q6UX72 402 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 HSPBAP1Q96EW2 488 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 PICK1Q9NRD5 415 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 APOBEC2Q9Y235 224 aaKnown RBP8.57□□□□□ -1.04
CLK4-202ENST00000519132 TPP1O14773 563 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 BAG6P46379 1132 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 KLF1Q13351 362 aaPredicted RBP8.57□□□□□ -1.04
CLK4-202ENST00000519132 BROXQ5VW32 411 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 CMTR2Q8IYT2 770 aaKnown RBP8.57□□□□□ -1.04
CLK4-202ENST00000519132 WNT10AQ9GZT5 417 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 MKS1Q9NXB0 559 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 SERPINB13Q9UIV8 391 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 ZHX1Q9UKY1 873 aaPredicted RBP8.57□□□□□ -1.04
CLK4-202ENST00000519132 BLMP54132 1417 aaPredicted RBP8.57□□□□□ -1.04
CLK4-202ENST00000519132 PEAK1Q9H792 1746 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 AHDC1Q5TGY3 1603 aaPredicted RBP8.57□□□□□ -1.04
CLK4-202ENST00000519132 ROBO1Q9Y6N7 1651 aa8.57□□□□□ -1.04
CLK4-202ENST00000519132 NFAT5O94916 1531 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms