RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 F2P00734 622 aa6.33□□□□□ -1.4
SQLE-202ENST00000518604 CNGA1P29973 690 aa6.33□□□□□ -1.4
SQLE-202ENST00000518604 ZC3H14Q6PJT7 736 aaKnown RBP6.33□□□□□ -1.4
SQLE-202ENST00000518604 EP400NLQ6ZTU2 488 aa6.33□□□□□ -1.4
SQLE-202ENST00000518604 OR2W6PQ8NHA6 318 aa6.33□□□□□ -1.4
SQLE-202ENST00000518604 LEO1Q8WVC0 666 aaPredicted RBP6.33□□□□□ -1.4
SQLE-202ENST00000518604 MYOTQ9UBF9 498 aa6.33□□□□□ -1.4
SQLE-202ENST00000518604 ZKSCAN5Q9Y2L8 839 aa6.33□□□□□ -1.4
SQLE-202ENST00000518604 NOP58Q9Y2X3 529 aaKnown RBP6.33□□□□□ -1.4
SQLE-202ENST00000518604 PCDHB4Q9Y5E5 795 aa6.33□□□□□ -1.4
SQLE-202ENST00000518604 SLC12A8A0AV02 714 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 ZNF503-AS2A6NEH8 195 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 PEX10O60683 326 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 AMY2AP04746 511 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 AMY2BP19961 511 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 GJA4P35212 333 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 EPHA5P54756 1037 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 JAM2P57087 298 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 PRR5P85299 388 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 FIGNQ5HY92 759 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 PKN3Q6P5Z2 889 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 MPZL3Q6UWV2 235 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 MILR1Q7Z6M3 343 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 TTLL11Q8NHH1 800 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 BOCQ9BWV1 1114 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.32□□□□□ -1.4
SQLE-202ENST00000518604 SMURF1Q9HCE7 757 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 PCDH12Q9NPG4 1184 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 ASH2LQ9UBL3 628 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 PALD1Q9ULE6 856 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 SRPK3Q9UPE1 567 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 CARMIL2Q6F5E8 1435 aa6.32□□□□□ -1.4
SQLE-202ENST00000518604 TCRBV5S4A2TA0A5A2 114 aa6.31□□□□□ -1.4
SQLE-202ENST00000518604 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.31□□□□□ -1.4
SQLE-202ENST00000518604 ZEB2O60315 1214 aa6.31□□□□□ -1.4
SQLE-202ENST00000518604 BRINP1O60477 761 aa6.31□□□□□ -1.4
SQLE-202ENST00000518604 GAS7O60861 476 aa6.31□□□□□ -1.4
SQLE-202ENST00000518604 CLASP2O75122 1294 aaKnown RBP6.31□□□□□ -1.4
SQLE-202ENST00000518604 NFKB2Q00653 900 aa6.31□□□□□ -1.4
SQLE-202ENST00000518604 OCRLQ01968 901 aa6.31□□□□□ -1.4
SQLE-202ENST00000518604 SART3Q15020 963 aaKnown RBP6.31□□□□□ -1.4
SQLE-202ENST00000518604 SEPT7Q16181 437 aaKnown RBP6.31□□□□□ -1.4
SQLE-202ENST00000518604 PLEKHN1Q494U1 663 aaPredicted RBP6.31□□□□□ -1.4
SQLE-202ENST00000518604 KCTD1Q719H9 257 aa6.31□□□□□ -1.4
SQLE-202ENST00000518604 AFAP1L2Q8N4X5 818 aa6.31□□□□□ -1.4
SQLE-202ENST00000518604 CISD2Q8N5K1 135 aaKnown RBP6.31□□□□□ -1.4
SQLE-202ENST00000518604 SH3RF2Q8TEC5 729 aa6.31□□□□□ -1.4
SQLE-202ENST00000518604 SCYL1Q96KG9 808 aa6.31□□□□□ -1.4
SQLE-202ENST00000518604 NGRNQ9NPE2 291 aaKnown RBP6.31□□□□□ -1.4
SQLE-202ENST00000518604 ATP23Q9Y6H3 246 aa6.31□□□□□ -1.4
SQLE-202ENST00000518604 TCRBV5S2A0A599 114 aa6.3□□□□□ -1.4
SQLE-202ENST00000518604 PTPDC1A2A3K4 754 aa6.3□□□□□ -1.4
SQLE-202ENST00000518604 MAN2B1O00754 1011 aa6.3□□□□□ -1.4
SQLE-202ENST00000518604 SLC27A2O14975 620 aa6.3□□□□□ -1.4
SQLE-202ENST00000518604 TAL1P17542 331 aaPredicted RBP6.3□□□□□ -1.4
SQLE-202ENST00000518604 KRT15P19012 456 aa6.3□□□□□ -1.4
SQLE-202ENST00000518604 SDHBP21912 280 aa6.3□□□□□ -1.4
SQLE-202ENST00000518604 AMPD3Q01432 767 aa6.3□□□□□ -1.4
SQLE-202ENST00000518604 DSG1Q02413 1049 aa6.3□□□□□ -1.4
SQLE-202ENST00000518604 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.3□□□□□ -1.4
SQLE-202ENST00000518604 PTRH1Q86Y79 214 aaKnown RBP6.3□□□□□ -1.4
SQLE-202ENST00000518604 UBR7Q8N806 425 aa6.3□□□□□ -1.4
SQLE-202ENST00000518604 LIN37Q96GY3 246 aaPredicted RBP6.3□□□□□ -1.4
SQLE-202ENST00000518604 MCM8Q9UJA3 840 aa6.3□□□□□ -1.4
SQLE-202ENST00000518604 SIT1Q9Y3P8 196 aa6.3□□□□□ -1.4
SQLE-202ENST00000518604 hCG_2014768A0A024R1R8 64 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 HIP1RO75146 1068 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 ZBTB48P10074 688 aaPredicted RBP6.29□□□□□ -1.4
SQLE-202ENST00000518604 BPIP17213 487 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 VIPR1P32241 457 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 IGBP1P78318 339 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 TUSC3Q13454 348 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 MIB1Q86YT6 1006 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 ANKRD13AQ8IZ07 590 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 SMC1BQ8NDV3 1235 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 CPA5Q8WXQ8 436 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 USP7Q93009 1102 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 GPATCH3Q96I76 525 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 TTC1Q99614 292 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 RNF38Q9H0F5 515 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 EPB41L4BQ9H329 900 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 IFT22Q9H7X7 185 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 RXFP1Q9HBX9 757 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 HSPBP1Q9NZL4 362 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 ATP8A1Q9Y2Q0 1164 aa6.29□□□□□ -1.4
SQLE-202ENST00000518604 H7C1D1 291 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 EYA4O95677 639 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 POU3F3P20264 500 aaPredicted RBP6.28□□□□□ -1.4
SQLE-202ENST00000518604 ANAPC15P60006 121 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 SRSF3P84103 164 aaKnown RBP6.28□□□□□ -1.4
SQLE-202ENST00000518604 IRF9Q00978 393 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 TARBP2Q15633 366 aaKnown RBP6.28□□□□□ -1.4
SQLE-202ENST00000518604 TMC6Q7Z403 805 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 ZNF605Q86T29 641 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 AMIGO3Q86WK7 504 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 NOSTRINQ8IVI9 506 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 FAM126BQ8IXS8 530 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 CLEC4DQ8WXI8 215 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 ALG3Q92685 438 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 DLG3Q92796 817 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms