RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 MCF2L2Q86YR7 1114 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 REXO1L1PQ8IX06 675 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 MYOCDQ8IZQ8 938 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 CPXCR1Q8N123 301 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 SYT2Q8N9I0 419 aaPredicted RBP29.52■■■□□ 2.32
COL13A1-210ENST00000517713 GLIS3Q8NEA6 775 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 PSMD10O75832 226 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 FGFR1OPO95684 399 aaKnown RBP29.52■■■□□ 2.32
COL13A1-210ENST00000517713 TUBB4AP04350 444 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 MTIF2P46199 727 aaKnown RBP29.52■■■□□ 2.32
COL13A1-210ENST00000517713 SPP2Q13103 211 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 PRAMEF18Q5VWM3 479 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 ARHGAP27Q6ZUM4 889 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 UPF1Q92900 1129 aaKnown RBP eCLIP29.52■■■□□ 2.32
COL13A1-210ENST00000517713 RPAP3Q9H6T3 665 aaPredicted RBP29.52■■■□□ 2.32
COL13A1-210ENST00000517713 PPP1R9AQ9ULJ8 1098 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 RABGAP1Q9Y3P9 1069 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 B4DLN1 442 aa29.51■■■□□ 2.31
COL13A1-210ENST00000517713 NFIBO00712 420 aa29.51■■■□□ 2.31
COL13A1-210ENST00000517713 PABPC4Q13310 644 aaKnown RBP eCLIP29.51■■■□□ 2.31
COL13A1-210ENST00000517713 FOXR2Q6PJQ5 311 aa29.51■■■□□ 2.31
COL13A1-210ENST00000517713 WRNIP1Q96S55 665 aa29.51■■■□□ 2.31
COL13A1-210ENST00000517713 AS3MTQ9HBK9 375 aa29.51■■■□□ 2.31
COL13A1-210ENST00000517713 RAVER2Q9HCJ3 691 aaKnown RBP29.51■■■□□ 2.31
COL13A1-210ENST00000517713 SETQ01105 290 aaPredicted RBP29.5■■■□□ 2.31
COL13A1-210ENST00000517713 CYP4A11Q02928 519 aa29.5■■■□□ 2.31
COL13A1-210ENST00000517713 PPP2R5CQ13362 524 aa29.5■■■□□ 2.31
COL13A1-210ENST00000517713 TOGARAM2Q6ZUX3 1019 aa29.5■■■□□ 2.31
COL13A1-210ENST00000517713 GPC2Q8N158 579 aa29.5■■■□□ 2.31
COL13A1-210ENST00000517713 KCTD17Q8N5Z5 321 aa29.5■■■□□ 2.31
COL13A1-210ENST00000517713 KIF18AQ8NI77 898 aa29.5■■■□□ 2.31
COL13A1-210ENST00000517713 ZKSCAN4Q969J2 545 aaPredicted RBP29.5■■■□□ 2.31
COL13A1-210ENST00000517713 TSG101Q99816 390 aa29.5■■■□□ 2.31
COL13A1-210ENST00000517713 PICK1Q9NRD5 415 aa29.5■■■□□ 2.31
COL13A1-210ENST00000517713 PCDHA2Q9Y5H9 948 aa29.5■■■□□ 2.31
COL13A1-210ENST00000517713 FRMD3A2A2Y4 597 aa29.5■■■□□ 2.31
COL13A1-210ENST00000517713 ALAS1P13196 640 aa29.5■■■□□ 2.31
COL13A1-210ENST00000517713 CACNB1Q02641 598 aaPredicted RBP29.5■■■□□ 2.31
COL13A1-210ENST00000517713 RAD51AP2Q09MP3 1159 aa29.5■■■□□ 2.31
COL13A1-210ENST00000517713 HERC4Q5GLZ8 1057 aaPredicted RBP29.5■■■□□ 2.31
COL13A1-210ENST00000517713 LMNB1P20700 586 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 BACE1P56817 501 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 ZNF577Q9BSK1 485 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 NOC4LQ9BVI4 516 aaKnown RBP29.49■■■□□ 2.31
COL13A1-210ENST00000517713 RGL1Q9NZL6 768 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 TBC1D7Q9P0N9 293 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 CTDP1Q9Y5B0 961 aaPredicted RBP29.49■■■□□ 2.31
COL13A1-210ENST00000517713 SOWAHDA6NJG2 315 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 GAS7O60861 476 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 PTPRAP18433 802 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 FECHP22830 423 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 GHRHRQ02643 423 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 ZFP91Q96JP5 570 aaPredicted RBP29.49■■■□□ 2.31
COL13A1-210ENST00000517713 HSD17B14Q9BPX1 270 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 TUFT1Q9NNX1 390 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 ABHD10Q9NUJ1 306 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 COL20A1Q9P218 1284 aa29.49■■■□□ 2.31
COL13A1-210ENST00000517713 RPTORQ8N122 1335 aa29.48■■■□□ 2.31
COL13A1-210ENST00000517713 RNF225M0QZC1 329 aaPredicted RBP29.48■■■□□ 2.31
COL13A1-210ENST00000517713 ARP10275 920 aa29.48■■■□□ 2.31
COL13A1-210ENST00000517713 GIT2Q14161 759 aa29.48■■■□□ 2.31
COL13A1-210ENST00000517713 SLC30A10Q6XR72 485 aa29.48■■■□□ 2.31
COL13A1-210ENST00000517713 ZNF280CQ8ND82 737 aa29.48■■■□□ 2.31
COL13A1-210ENST00000517713 MXRA8Q9BRK3 442 aa29.48■■■□□ 2.31
COL13A1-210ENST00000517713 GGA3Q9NZ52 723 aa29.48■■■□□ 2.31
COL13A1-210ENST00000517713 ZBED4O75132 1171 aa29.47■■■□□ 2.31
COL13A1-210ENST00000517713 TBC1D8BQ0IIM8 1120 aa29.47■■■□□ 2.31
COL13A1-210ENST00000517713 MIIPQ5JXC2 388 aa29.47■■■□□ 2.31
COL13A1-210ENST00000517713 FGFBP2Q9BYJ0 223 aa29.47■■■□□ 2.31
COL13A1-210ENST00000517713 CHMP2AO43633 222 aa29.47■■■□□ 2.31
COL13A1-210ENST00000517713 EYA4O95677 639 aa29.47■■■□□ 2.31
COL13A1-210ENST00000517713 MTF1Q14872 753 aa29.47■■■□□ 2.31
COL13A1-210ENST00000517713 MUM1L1Q5H9M0 696 aa29.47■■■□□ 2.31
COL13A1-210ENST00000517713 KRT26Q7Z3Y9 468 aa29.47■■■□□ 2.31
COL13A1-210ENST00000517713 WDR11Q9BZH6 1224 aa29.47■■■□□ 2.31
COL13A1-210ENST00000517713 PNMA2Q9UL42 364 aa29.47■■■□□ 2.31
COL13A1-210ENST00000517713 FZD1Q9UP38 647 aa29.47■■■□□ 2.31
COL13A1-210ENST00000517713 GOLGA6L9A6NEM1 432 aa29.46■■■□□ 2.31
COL13A1-210ENST00000517713 FDX1P10109 184 aa29.46■■■□□ 2.31
COL13A1-210ENST00000517713 SAMD3Q8N6K7 520 aa29.46■■■□□ 2.31
COL13A1-210ENST00000517713 ZHX3Q9H4I2 956 aa29.46■■■□□ 2.31
COL13A1-210ENST00000517713 HOMER2Q9NSB8 354 aa29.46■■■□□ 2.31
COL13A1-210ENST00000517713 MAP3K20Q9NYL2 800 aaKnown RBP29.46■■■□□ 2.31
COL13A1-210ENST00000517713 PPP2R3BQ9Y5P8 575 aa29.46■■■□□ 2.31
COL13A1-210ENST00000517713 DICER1Q9UPY3 1922 aaKnown RBP29.46■■■□□ 2.31
COL13A1-210ENST00000517713 SLITRK3O94933 977 aa29.45■■■□□ 2.31
COL13A1-210ENST00000517713 KIF20AO95235 890 aa29.45■■■□□ 2.31
COL13A1-210ENST00000517713 KRT9P35527 623 aa29.45■■■□□ 2.31
COL13A1-210ENST00000517713 EPS15P42566 896 aa29.45■■■□□ 2.31
COL13A1-210ENST00000517713 CTTNQ14247 550 aaKnown RBP29.45■■■□□ 2.31
COL13A1-210ENST00000517713 ZCWPW2Q504Y3 356 aa29.45■■■□□ 2.31
COL13A1-210ENST00000517713 RAD9BQ6WBX8 426 aa29.45■■■□□ 2.31
COL13A1-210ENST00000517713 SYT10Q6XYQ8 523 aa29.45■■■□□ 2.31
COL13A1-210ENST00000517713 LRRC55Q6ZSA7 311 aa29.45■■■□□ 2.31
COL13A1-210ENST00000517713 DYDC2Q96IM9 177 aa29.45■■■□□ 2.31
COL13A1-210ENST00000517713 BHMT2Q9H2M3 363 aa29.45■■■□□ 2.31
COL13A1-210ENST00000517713 HIRAP54198 1017 aaPredicted RBP29.45■■■□□ 2.3
COL13A1-210ENST00000517713 REEP2Q9BRK0 252 aa29.45■■■□□ 2.3
COL13A1-210ENST00000517713 TTC26A0AVF1 554 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 ETF1P62495 437 aaKnown RBP29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms