RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 PRAMEF18Q5VWM3 479 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 NAA16Q6N069 864 aaPredicted RBP3.27□□□□□ -1.89
SKP1-204ENST00000517691 DLK2Q6UY11 383 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 CHD1LQ86WJ1 897 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 CACTIN-AS1Q8N1I8 211 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 HNRNPLLQ8WVV9 542 aaKnown RBP3.27□□□□□ -1.89
SKP1-204ENST00000517691 PMEPA1Q969W9 287 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 NAP1L4Q99733 375 aaKnown RBP3.27□□□□□ -1.89
SKP1-204ENST00000517691 NOL10Q9BSC4 688 aaKnown RBP3.27□□□□□ -1.89
SKP1-204ENST00000517691 PAGR1Q9BTK6 254 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 INO80BQ9C086 356 aaPredicted RBP3.27□□□□□ -1.89
SKP1-204ENST00000517691 ANTXR1Q9H6X2 564 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 PIH1D3Q9NQM4 214 aaKnown RBP3.27□□□□□ -1.89
SKP1-204ENST00000517691 ECHDC1Q9NTX5 307 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 USP40Q9NVE5 1235 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 TMOD2Q9NZR1 351 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 SIRPGQ9P1W8 387 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 KANSL3Q9P2N6 904 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 ABT1Q9ULW3 272 aaKnown RBP3.27□□□□□ -1.89
SKP1-204ENST00000517691 KCNH4Q9UQ05 1017 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 OAS3Q9Y6K5 1087 aaKnown RBP3.27□□□□□ -1.89
SKP1-204ENST00000517691 LRRC37AA6NMS7 1700 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 MYH3P11055 1940 aa3.27□□□□□ -1.89
SKP1-204ENST00000517691 SPEF2Q9C093 1822 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 C2CD2LO14523 706 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 MMP20O60882 483 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 CAND2O75155 1236 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 CELF2O95319 508 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 BAG3O95817 575 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 SSBP05455 408 aaKnown RBP eCLIP3.26□□□□□ -1.89
SKP1-204ENST00000517691 KRT18P05783 430 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 ATP5JP18859 108 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 MX1P20591 662 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 CYP7A1P22680 504 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 NF2P35240 595 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 BTDP43251 543 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 HTRA3P83110 453 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 EXOSC10Q01780 885 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 NUCB1Q02818 461 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 TCP10Q12799 353 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 GRM1Q13255 1194 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 SQSTM1Q13501 440 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 PRKG1Q13976 671 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 C21orf62-AS1Q17RA5 79 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 SLC9C2Q5TAH2 1124 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 COL13A1Q5TAT6 717 aaPredicted RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 HHIPL2Q6UWX4 724 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 PCGF5Q86SE9 256 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 MAGEB6Q8N7X4 407 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 C1orf131Q8NDD1 294 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 OR13H1Q8NG92 308 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 OTUD7AQ8TE49 926 aaPredicted RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 SECISBP2LQ93073 1101 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 EDC3Q96F86 508 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 ZDHHC15Q96MV8 337 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 TCF12Q99081 682 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 TRIM56Q9BRZ2 755 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 MRIQ9BWK5 157 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 TRIM55Q9BYV6 548 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.26□□□□□ -1.89
SKP1-204ENST00000517691 DEFB129Q9H1M3 183 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 PPCSQ9HAB8 311 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 CASS4Q9NQ75 786 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 JADE2Q9NQC1 790 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 KBTBD4Q9NVX7 518 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 PAG1Q9NWQ8 432 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 ZNF70Q9UC06 446 aaPredicted RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 PGAP2Q9UHJ9 254 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 PDS5AQ29RF7 1337 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 SALL1Q9NSC2 1324 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 SBF1O95248 1867 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 LTBP1Q14766 1721 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 TIAM2Q8IVF5 1701 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 GLRX3O76003 335 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 FAM163BP0C2L3 166 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 FAM157BP0CG42 384 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 HSPA6P17066 643 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 CDC27P30260 824 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 GSTT1P30711 240 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 TNP2Q05952 138 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 PICALMQ13492 652 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 TNFAIP1Q13829 316 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 CCINQ13939 588 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 RAB33AQ14088 237 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 BRD3Q15059 726 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 ZRSR2Q15696 482 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 ZSCAN25Q6NSZ9 544 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 APOBEC3HQ6NTF7 200 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 CDC42EP5Q6NZY7 148 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 KRT25Q7Z3Z0 450 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 APOBEC3FQ8IUX4 373 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 SAMD3Q8N6K7 520 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 C2orf69Q8N8R5 385 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 MIGA1Q8NAN2 632 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.26□□□□□ -1.89
SKP1-204ENST00000517691 RILPL2Q969X0 211 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 NSUN4Q96CB9 384 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 CDCA5Q96FF9 252 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 HAUS7Q99871 368 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms