RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 PUS10Q3MIT2 529 aaKnown RBP8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 HSDL1Q3SXM5 330 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CASC1Q6TDU7 716 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SYNE3Q6ZMZ3 975 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CYFIP1Q7L576 1253 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 VSIG10LQ86VR7 867 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 STAG2Q8N3U4 1231 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 DBF4BQ8NFT6 615 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 NCOA7Q8NI08 942 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 KAT2BQ92831 832 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 GLG1Q92896 1179 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 ZFP91Q96JP5 570 aaPredicted RBP8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SAMD11Q96NU1 681 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PIGSQ96S52 555 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PDCD2LQ9BRP1 358 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 IFIH1Q9BYX4 1025 aaKnown RBP8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 EHMT1Q9H9B1 1298 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SUGCTQ9HAC7 445 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 GREB1LQ9C091 1923 aaPredicted RBP8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PARP14Q460N5 1801 aa8.5□□□□□ -1.05
TNFRSF11B-202ENST00000517352 LINC01553A4QN01 128 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 EPOPA6NHQ4 379 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SPDYE3A6NKU9 549 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 M0QZ92 97 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 FIBPO43427 364 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 NBNO60934 754 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CXCL10P02778 98 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SMIM10L2AP0DMW4 78 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SMIM10L2BP0DMW5 78 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 ALADP13716 330 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 IBSPP21815 317 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 UBA1P22314 1058 aaKnown RBP8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 HSD17B4P51659 736 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 ERVK-21P61565 698 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 GPM6BQ13491 265 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 STOX1Q6ZVD7 989 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SMC5Q8IY18 1101 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 GJD3Q8N144 294 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 FIBCD1Q8N539 461 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 APBB2Q92870 758 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PPP2R3CQ969Q6 453 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CDHR1Q96JP9 859 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 OSBPL3Q9H4L5 887 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 UBE2ZQ9H832 354 aaPredicted RBP8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SETD4Q9NVD3 440 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 RAPGEFL1Q9UHV5 662 aa8.49□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CAND2O75155 1236 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CSPG5O95196 566 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 LGALS2P05162 132 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PLA2G5P39877 138 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 GNAQP50148 359 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 TIGD5Q53EQ6 642 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PTCRAQ6ISU1 281 aaPredicted RBP8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 METTL7BQ6UX53 244 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SERINC5Q86VE9 423 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 RASEFQ8IZ41 740 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 BANK1Q8NDB2 785 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 IL17RAQ96F46 866 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 LZTS2Q9BRK4 669 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 C17orf80Q9BSJ5 609 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 RNPEPQ9H4A4 650 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 AZI2Q9H6S1 392 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 TCEAL9Q9UHQ7 104 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 MAD2L2Q9UI95 211 aa8.48□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CHD9Q3L8U1 2897 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PALM3A6NDB9 673 aaPredicted RBP8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 HAS3O00219 553 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 TREHO43280 583 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 NCK2O43639 380 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 IGHDP01880 384 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CTNNB1P35222 781 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 IGBP1P78318 339 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 FGD1P98174 961 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 RBL2Q08999 1139 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PPFIA1Q13136 1202 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 BTG3Q14201 252 aaPredicted RBP8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 GRM4Q14833 912 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 EPC2Q52LR7 807 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 SPOUT1Q5T280 376 aaKnown RBP8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 TAF2Q6P1X5 1199 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 XRRA1Q6P2D8 792 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 TMTC2Q8N394 836 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 DHX38Q92620 1227 aaKnown RBP8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 MRPL38Q96DV4 380 aaKnown RBP8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 UPF3BQ9BZI7 483 aaKnown RBP8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 EPHX3Q9H6B9 360 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PSTPIP2Q9H939 334 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 CLDND1Q9NY35 253 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 ERAP1Q9NZ08 941 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 PKD2L1Q9P0L9 805 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 RWDD3Q9Y3V2 267 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 MCM3APO60318 1980 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 NRCAMQ92823 1304 aa8.47□□□□□ -1.05
TNFRSF11B-202ENST00000517352 BDP1A6H8Y1 2624 aa8.46□□□□□ -1.05
TNFRSF11B-202ENST00000517352 FAM86C2PA6NEL3 165 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 SPATA31C2B4DYI2 1134 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 E7EWF7 191 aa8.46□□□□□ -1.06
TNFRSF11B-202ENST00000517352 H3BQ06 376 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms