RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 FOXI1Q12951 378 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 SKIV2LQ15477 1246 aaKnown RBP-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 NPY5RQ15761 445 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 PLEKHG4Q58EX7 1191 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 COX20Q5RI15 118 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 CCDC62Q6P9F0 684 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 Q6ZRM9 215 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 Q6ZUG5 572 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 ADGRE4PQ86SQ3 457 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 ZNF485Q8NCK3 441 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 LINC00116Q8NCU8 138 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 DPF1Q92782 380 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 TCTN2Q96GX1 697 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 ZNF594Q96JF6 807 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 TMEM209Q96SK2 561 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 TRAF4Q9BUZ4 470 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 ALOXE3Q9BYJ1 711 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 KIAA1683Q9H0B3 1180 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 KCNH6Q9H252 994 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 SERHL2Q9H4I8 314 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 SLC7A10Q9NS82 523 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 SYBUQ9NX95 663 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 DNMT3BQ9UBC3 853 aaKnown RBP-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 FAM90A10PA6NDY2 464 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 PHACTR2O75167 634 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 GLI4P10075 376 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 ZNF10P21506 573 aaPredicted RBP-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 ITPKBP27987 946 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 LTBRP36941 435 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 MAN2A2P49641 1150 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 RNF151Q2KHN1 245 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 RABL3Q5HYI8 236 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 FAM26DQ5JW98 314 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 LARGE2Q8N3Y3 721 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 NFATC2IPQ8NCF5 419 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 BANK1Q8NDB2 785 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 REPS2Q8NFH8 660 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 DNAJB8Q8NHS0 232 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 SYTL5Q8TDW5 730 aaPredicted RBP-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 NUDT16Q96DE0 195 aaKnown RBP-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 TCF12Q99081 682 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 HDAC8Q9BY41 377 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 WDR11Q9BZH6 1224 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 GP6Q9HCN6 339 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 ZIM2Q9NZV7 527 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 NTNG1Q9Y2I2 539 aa-0.05□□□□□ -2.42
SNORA40.16-201ENST00000517238 CENPVL1A0A0U1RR11 272 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 TRAFD1O14545 582 aaPredicted RBP-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 FOXO3O43524 673 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 HKR1P10072 659 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 ENDOUP21128 410 aaKnown RBP-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 NMIQ13287 307 aaPredicted RBP-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 SULF2Q8IWU5 870 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 SIX5Q8N196 739 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 ANKRD35Q8N283 1001 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 OGFOD1Q8N543 542 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 ZNF655Q8N720 491 aaPredicted RBP-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 TTC16Q8NEE8 873 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 ENOX1Q8TC92 643 aaKnown RBP-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 RNF141Q8WVD5 230 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 CASKIN2Q8WXE0 1202 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 LINC00476Q8WZB0 136 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 TMEM176AQ96HP8 235 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 COQ10AQ96MF6 247 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 WRNIP1Q96S55 665 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 KLK15Q9H2R5 256 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 ALG13Q9NP73 1137 aaKnown RBP-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 ANKFY1Q9P2R3 1169 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 PTPN22Q9Y2R2 807 aa-0.06□□□□□ -2.42
SNORA40.16-201ENST00000517238 B4E1Z4 1266 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 OAZ2O95190 189 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 ZNF888P0CJ79 500 aaPredicted RBP-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 ITPKAP23677 461 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 STAT5AP42229 794 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 SLC6A11P48066 632 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 NPEPPSP55786 919 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 CFHR1Q03591 330 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 PPP2R3AQ06190 1150 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 ADAM15Q13444 863 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 TRIM25Q14258 630 aaKnown RBP-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 USP10Q14694 798 aaKnown RBP-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 BMT2Q1RMZ1 405 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 ZNF772Q68DY9 489 aaPredicted RBP-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 C15orf39Q6ZRI6 1047 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 KRT73Q86Y46 540 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 NAT16Q8N8M0 369 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 DAGLBQ8NCG7 672 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 HASPINQ8TF76 798 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 SLC9A6Q92581 669 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 AJUBAQ96IF1 538 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 WNT10AQ9GZT5 417 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 SPRTNQ9H040 489 aaPredicted RBP-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 CBX8Q9HC52 389 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 TRMT13Q9NUP7 481 aaKnown RBP-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 FLRT1Q9NZU1 646 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 TRPS1Q9UHF7 1281 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 GPN3Q9UHW5 284 aaPredicted RBP-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 MCM8Q9UJA3 840 aa-0.07□□□□□ -2.42
SNORA40.16-201ENST00000517238 PCDHA4Q9UN74 947 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms