RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 TMEM87AQ8NBN3 555 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CD99L2Q8TCZ2 262 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 BRF1Q92994 677 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 KLF16Q9BXK1 252 aaPredicted RBP6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ZFAND3Q9H8U3 227 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 RAVER2Q9HCJ3 691 aaKnown RBP6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 BTBD7Q9P203 1132 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 MYPNQ86TC9 1320 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 WDR19Q8NEZ3 1342 aa6.73□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PHIPQ8WWQ0 1821 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ZBTB43O43298 467 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SORBS3O60504 671 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PLA2G6O60733 806 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CNMDO75829 334 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 DDAH1O94760 285 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 HOXD10P28358 340 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ERCC5P28715 1186 aaPredicted RBP6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 KIF5BP33176 963 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 GNAQP50148 359 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 FCGRTP55899 365 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 WDR4P57081 412 aaKnown RBP6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 LACTBP83111 547 aaPredicted RBP6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PSMD2Q13200 908 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ENOX2Q16206 610 aaKnown RBP6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ZNF697Q5TEC3 545 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 C1orf53Q5VUE5 145 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SNRNP48Q6IEG0 339 aaKnown RBP6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 BTNL9Q6UXG8 535 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 NOL8Q76FK4 1167 aaKnown RBP6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 MICU3Q86XE3 530 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TREML1Q86YW5 311 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ADGRF4Q8IZF3 695 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 CMTR1Q8N1G2 835 aaKnown RBP6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SNIP1Q8TAD8 396 aaKnown RBP6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PIBF1Q8WXW3 757 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 COA7Q96BR5 231 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 DRC1Q96MC2 740 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 LZTS2Q9BRK4 669 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 MOV10L1Q9BXT6 1211 aaKnown RBP6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ARHGAP39Q9C0H5 1083 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SPATC1LQ9H0A9 340 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 EFCC1Q9HA90 598 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 SLC38A10Q9HBR0 1119 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PRDM10Q9NQV6 1147 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 MORF4L1Q9UBU8 362 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 MAD2L2Q9UI95 211 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ADAMTS5Q9UNA0 930 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 TRIM17Q9Y577 477 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 ADGRA2Q96PE1 1338 aa6.72□□□□□ -1.33
SCARNA6.1-201ENST00000516989 PNMA6FA0A0J9YX94 578 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GOLGA8AA7E2F4 631 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GOLGA8BA8MQT2 603 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TNPO2O14787 897 aaKnown RBP6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SLC25A27O95847 323 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ALAS1P13196 640 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PCSK2P16519 638 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CTGFP29279 349 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MAPK4P31152 587 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 METAP2P50579 478 aaKnown RBP eCLIP6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 AK2P54819 239 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CCT2P78371 535 aaKnown RBP6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 STK3Q13188 491 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ANKRD1Q15327 319 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 NAALADL2Q58DX5 795 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ALG1LQ6GMV1 187 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PLEKHH3Q7Z736 793 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ZNF598Q86UK7 904 aaKnown RBP6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 HOMER1Q86YM7 354 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GPR152Q8TDT2 470 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RHBDD1Q8TEB9 315 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MAP3K14Q99558 947 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TEX13BQ9BXU2 312 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PORCNQ9H237 461 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RANBP17Q9H2T7 1088 aaKnown RBP6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MROH8Q9H579 483 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PKD2L1Q9P0L9 805 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CCPG1Q9ULG6 757 aa6.71□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GREB1LQ9C091 1923 aaPredicted RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CCDC196A0A1B0GTZ2 297 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 J3QL48 77 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PLEKHA8P1O95397 391 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ICAM1P05362 532 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CYP2B6P20813 491 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PDIA3P30101 505 aaKnown RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TXLNAP40222 546 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 OAZ1P54368 228 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CAP1Q01518 475 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TOB2Q14106 344 aaPredicted RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PPP2R5BQ15173 497 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RABEP1Q15276 862 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CDC37Q16543 378 aaPredicted RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 QRICH1Q2TAL8 776 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 USH1GQ495M9 461 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 APOA5Q6Q788 366 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 OTOP1Q7RTM1 612 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GPR142Q7Z601 462 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CTU1Q7Z7A3 348 aaKnown RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 NBPF11Q86T75 865 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 DPP9Q86TI2 863 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RIOX2Q8IUF8 465 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms