RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 FAM86B1E9PN63 330 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 KIAA0355O15063 1070 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 ST18O60284 1047 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 SORBS3O60504 671 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 FAM86B2P0C5J1 330 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 ARP10275 920 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 CIITAP33076 1130 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 BMP8BP34820 402 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 ZNF76P36508 570 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 GPR20Q99678 358 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 C16orf70Q9BSU1 422 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 ALG1Q9BT22 464 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 PRO3102Q9H379 93 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 PDLIM7Q9NR12 457 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 GJB4Q9NTQ9 266 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 TMEM39AQ9NV64 488 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 KCNJ14Q9UNX9 436 aa12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 COLQQ9Y215 455 aaPredicted RBP12.71□□□□□ -0.37
SCARNA20-201ENST00000516768 IGLV3-22A0A075B6J6 115 aa12.7□□□□□ -0.38
SCARNA20-201ENST00000516768 HAS3O00219 553 aa12.7□□□□□ -0.38
SCARNA20-201ENST00000516768 TLR3O15455 904 aaKnown RBP12.7□□□□□ -0.38
SCARNA20-201ENST00000516768 JAK2O60674 1132 aa12.7□□□□□ -0.38
SCARNA20-201ENST00000516768 SUPT20HL2P0C7V6 817 aa12.7□□□□□ -0.38
SCARNA20-201ENST00000516768 ITGB8P26012 769 aa12.7□□□□□ -0.38
SCARNA20-201ENST00000516768 PTPN11Q06124 597 aaPredicted RBP12.7□□□□□ -0.38
SCARNA20-201ENST00000516768 CCDC83Q8IWF9 413 aa12.7□□□□□ -0.38
SCARNA20-201ENST00000516768 SEPT1Q8WYJ6 367 aa12.7□□□□□ -0.38
SCARNA20-201ENST00000516768 TRPV6Q9H1D0 765 aa12.7□□□□□ -0.38
SCARNA20-201ENST00000516768 TELO2Q9Y4R8 837 aa12.7□□□□□ -0.38
SCARNA20-201ENST00000516768 NFASCO94856 1347 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 MYH7BA7E2Y1 1941 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 GSTTP1A0A1W2PQM5 241 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 H3BRB1 525 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 NOP56O00567 594 aaKnown RBP12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 B4GALT4O60513 344 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 F2P00734 622 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 TIMP1P01033 207 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 MAGEA10P43363 369 aaPredicted RBP12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 CHRDL2Q6WN34 429 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 SESTD1Q86VW0 696 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 PLA2G4DQ86XP0 818 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 TBCKQ8TEA7 893 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 LBHD1Q9BQE6 289 aaPredicted RBP12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 KATNAL1Q9BW62 490 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 TUT1Q9H6E5 874 aaKnown RBP12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 AGO4Q9HCK5 861 aaKnown RBP12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 PRDM5Q9NQX1 630 aaPredicted RBP12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 TBX21Q9UL17 535 aa12.69□□□□□ -0.38
SCARNA20-201ENST00000516768 CYP3A7-CYP3A51PA0A087WV96 503 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 DHX15O43143 795 aaKnown RBP12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 ATG7O95352 703 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 RAG1P15918 1043 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 CYP3A7P24462 503 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 MCM2P49736 904 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 PSEN2P49810 448 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 ITGB3BPQ13352 177 aaPredicted RBP12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 MFSD10Q14728 455 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 NONOQ15233 471 aaKnown RBP eCLIP12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 KIAA0753Q2KHM9 967 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 KRT25Q7Z3Z0 450 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 OXER1Q8TDS5 423 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 BADQ92934 168 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 SDF4Q9BRK5 362 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 SLC9A2Q9UBY0 812 aa12.68□□□□□ -0.38
SCARNA20-201ENST00000516768 IPO5O00410 1097 aaKnown RBP12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 CD2BP2O95400 341 aaKnown RBP12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 LGALS2P05162 132 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 ZNF286BP0CG31 522 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 TCF7P36402 384 aaPredicted RBP12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 CHMP4BP1P59074 171 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 HMGN5P82970 282 aaKnown RBP12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 SP4Q02446 784 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 PRR16Q569H4 304 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 FAM47CQ5HY64 1035 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 KRT40Q6A162 431 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 C7orf31Q8N865 590 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 PPP1R13LQ8WUF5 828 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 LENG9Q96B70 501 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 TMX3Q96JJ7 454 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 JPH1Q9HDC5 661 aaPredicted RBP12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 TBC1D22BQ9NU19 505 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 TRMT13Q9NUP7 481 aaKnown RBP12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 PKD2L1Q9P0L9 805 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 PCDH10Q9P2E7 1040 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 HDAC6Q9UBN7 1215 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 SCN10AQ9Y5Y9 1956 aa12.67□□□□□ -0.38
SCARNA20-201ENST00000516768 CCDC194A0A1B0GVG4 234 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 BTBD18B2RXH4 712 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 MMP1P03956 469 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 ACTR2P61160 394 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 SETQ01105 290 aaPredicted RBP12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 TRIM29Q14134 588 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 PTGISQ16647 500 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 INF2Q27J81 1249 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 Q4G0T1 1027 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 GDF6Q6KF10 455 aaPredicted RBP12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 MFSD5Q6N075 450 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 MOXD1Q6UVY6 613 aa12.66□□□□□ -0.38
SCARNA20-201ENST00000516768 TNFRSF25Q93038 417 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms