RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 CBARPQ8N350 705 aaPredicted RBP2.4□□□□□ -2.03
AC025539.1-201ENST00000515343 IFT22Q9H7X7 185 aa2.4□□□□□ -2.03
AC025539.1-201ENST00000515343 ZSWIM5Q9P217 1185 aa2.4□□□□□ -2.03
AC025539.1-201ENST00000515343 LRP2BPQ9P2M1 347 aa2.4□□□□□ -2.03
AC025539.1-201ENST00000515343 ASB1Q9Y576 335 aa2.4□□□□□ -2.03
AC025539.1-201ENST00000515343 CEP170Q5SW79 1584 aa2.4□□□□□ -2.03
AC025539.1-201ENST00000515343 PMS2P1A4D2B8 440 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 MYO1BO43795 1136 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 SOD2P04179 222 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 CD3EP07766 207 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 TERF2Q15554 542 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 SPATS2Q86XZ4 545 aaKnown RBP2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 SLC41A1Q8IVJ1 513 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 PRPF38AQ8NAV1 312 aaKnown RBP2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 ZDHHC15Q96MV8 337 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 NUP88Q99567 741 aaPredicted RBP2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 AP5S1Q9NUS5 200 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 SRPK3Q9UPE1 567 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 CRTAMO95727 393 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 LCP1P13796 627 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 IBSPP21815 317 aaPredicted RBP2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 IGFBP6P24592 240 aaPredicted RBP2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 CDKN1CP49918 316 aaPredicted RBP2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 SPIRE1Q08AE8 756 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 PPP2R5DQ14738 602 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 USP53Q70EK8 1073 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 LINC00482Q8N8I6 264 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 OR2W6PQ8NHA6 318 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 ALG1Q9BT22 464 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 PITHD1Q9GZP4 211 aaPredicted RBP2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 IRF2BPLQ9H1B7 796 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 CARS2Q9HA77 564 aaKnown RBP2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 GPRC5CQ9NQ84 441 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 CLEC1BQ9P126 229 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 TEX14Q8IWB6 1497 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 WASH4PA8MWX3 477 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 IRS4O14654 1257 aaPredicted RBP2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 GLRX3O76003 335 aaKnown RBP2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 DBHP09172 617 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 PCBP1Q15365 356 aaKnown RBP eCLIP2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 PRSS53Q2L4Q9 553 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 NME9Q86XW9 330 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 DCP2Q8IU60 420 aaKnown RBP2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 FAM126BQ8IXS8 530 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 PEX11GQ96HA9 241 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 FOXB1Q99853 325 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 ZNF700Q9H0M5 742 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 LGR6Q9HBX8 967 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 ACSS2Q9NR19 701 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 CBLCQ9ULV8 474 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 SUGT1Q9Y2Z0 365 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 TOPBP1Q92547 1522 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 LRP5O75197 1615 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 STXBP3O00186 592 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 MAN2B1O00754 1011 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 RASGRP1O95267 797 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 VCAM1P19320 739 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 EPHB1P54762 984 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 IKZF1Q13422 519 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 WAPLQ7Z5K2 1190 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 RASSF3Q86WH2 238 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 SAMD15Q9P1V8 674 aa2.39□□□□□ -2.03
AC025539.1-201ENST00000515343 EPRSP07814 1512 aaKnown RBP2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 KRTAP4-8A0A0G2JLE6 195 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 CCDC66A2RUB6 948 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 MED14OSP0DP75 135 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 ATP2A2P16615 1042 aaKnown RBP2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 ZP2Q05996 745 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 NFE2Q16621 373 aaPredicted RBP2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 CYB5RLQ6IPT4 315 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 PKN3Q6P5Z2 889 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 STRA8Q7Z7C7 330 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 FAM181AQ8N9Y4 354 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 ZNF610Q8N9Z0 462 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 PI4K2BQ8TCG2 481 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 MINPP1Q9UNW1 487 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 PTPRTO14522 1441 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 hCG_2014768A0A024R1R8 64 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 WNT11O96014 354 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 ECI1P42126 302 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 GPR15P49685 360 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 HTRA3P83110 453 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 CRY1Q16526 586 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 BRDTQ58F21 947 aaPredicted RBP2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 FAM47CQ5HY64 1035 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 RALGPS1Q5JS13 557 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 ARHGAP27Q6ZUM4 889 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 RTN4RL1Q86UN2 441 aaPredicted RBP2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 DHX37Q8IY37 1157 aaKnown RBP2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 FAM43AQ8N2R8 423 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 FOXRED1Q96CU9 486 aaPredicted RBP2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 C8orf48Q96LL4 319 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 SLC6A17Q9H1V8 727 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 FBXL7Q9UJT9 491 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 ADCY10Q96PN6 1610 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 NUP160Q12769 1436 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 ABCA5Q8WWZ7 1642 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 TNRC18O15417 2968 aaPredicted RBP2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 MAFKO60675 156 aa2.38□□□□□ -2.03
AC025539.1-201ENST00000515343 RTP1P59025 263 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms