RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 TOP1P11387 765 aaKnown RBP13.87□□□□□ -0.19
CSF1R-208ENST00000515239 DNAJB1P25685 340 aa13.87□□□□□ -0.19
CSF1R-208ENST00000515239 HOXC8P31273 242 aa13.87□□□□□ -0.19
CSF1R-208ENST00000515239 ICAM3P32942 547 aa13.87□□□□□ -0.19
CSF1R-208ENST00000515239 ID4P47928 161 aa13.87□□□□□ -0.19
CSF1R-208ENST00000515239 MYSM1Q5VVJ2 828 aa13.87□□□□□ -0.19
CSF1R-208ENST00000515239 ADGRD2Q7Z7M1 963 aa13.87□□□□□ -0.19
CSF1R-208ENST00000515239 EFHBQ8N7U6 833 aa13.87□□□□□ -0.19
CSF1R-208ENST00000515239 ATP6V0A1Q93050 837 aa13.87□□□□□ -0.19
CSF1R-208ENST00000515239 PHF7Q9BWX1 381 aaPredicted RBP13.87□□□□□ -0.19
CSF1R-208ENST00000515239 MAF1Q9H063 256 aa13.87□□□□□ -0.19
CSF1R-208ENST00000515239 RC3H2Q9HBD1 1191 aaKnown RBP13.87□□□□□ -0.19
CSF1R-208ENST00000515239 USP15Q9Y4E8 981 aaPredicted RBP13.87□□□□□ -0.19
CSF1R-208ENST00000515239 MYH7BA7E2Y1 1941 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 C17orf102A2RUQ5 167 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 TREHO43280 583 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 GALR2O43603 387 aaPredicted RBP13.86□□□□□ -0.19
CSF1R-208ENST00000515239 EIF3JO75822 258 aaKnown RBP13.86□□□□□ -0.19
CSF1R-208ENST00000515239 FGRP09769 529 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 PDHBP11177 359 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 HSDL1Q3SXM5 330 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 USH1GQ495M9 461 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 APBB2Q92870 758 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 ZNF689Q96CS4 500 aaPredicted RBP13.86□□□□□ -0.19
CSF1R-208ENST00000515239 RPGRIP1Q96KN7 1286 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 RIPOR3Q96MK2 946 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 RMDN3Q96TC7 470 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 PLVAPQ9BX97 442 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 RNPEPQ9H4A4 650 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 ZBTB40Q9NUA8 1239 aa13.86□□□□□ -0.19
CSF1R-208ENST00000515239 DMDP11532 3685 aa13.85□□□□□ -0.19
CSF1R-208ENST00000515239 CAND2O75155 1236 aa13.85□□□□□ -0.19
CSF1R-208ENST00000515239 CTSHP09668 335 aa13.85□□□□□ -0.19
CSF1R-208ENST00000515239 ZNF543Q08ER8 600 aa13.85□□□□□ -0.19
CSF1R-208ENST00000515239 SPPL3Q8TCT6 385 aa13.85□□□□□ -0.19
CSF1R-208ENST00000515239 BARX2Q9UMQ3 279 aaPredicted RBP13.85□□□□□ -0.19
CSF1R-208ENST00000515239 MRVI1Q9Y6F6 885 aa13.85□□□□□ -0.19
CSF1R-208ENST00000515239 ADGRA3Q8IWK6 1321 aa13.85□□□□□ -0.19
CSF1R-208ENST00000515239 GVINP1Q7Z2Y8 2422 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 ENPP3O14638 875 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 ORC4O43929 436 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 RGS20O76081 388 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 GLP2RO95838 553 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 ITGB1P05556 798 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 NR3C2P08235 984 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 SNHG28P0DPA3 235 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 PTPN21Q16825 1174 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 FAM26DQ5JW98 314 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 CELF3Q5SZQ8 465 aaKnown RBP13.84□□□□□ -0.19
CSF1R-208ENST00000515239 P2RX5Q93086 422 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 SPATA33Q96N06 139 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 TCP11L1Q9NUJ3 509 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 ANAPC4Q9UJX5 808 aa13.84□□□□□ -0.19
CSF1R-208ENST00000515239 H3BRB1 525 aa13.83□□□□□ -0.2
CSF1R-208ENST00000515239 DGKIO75912 1065 aa13.83□□□□□ -0.2
CSF1R-208ENST00000515239 SMIM10L2AP0DMW4 78 aa13.83□□□□□ -0.2
CSF1R-208ENST00000515239 SMIM10L2BP0DMW5 78 aa13.83□□□□□ -0.2
CSF1R-208ENST00000515239 ATF7P17544 494 aaPredicted RBP13.83□□□□□ -0.2
CSF1R-208ENST00000515239 NRIP1P48552 1158 aa13.83□□□□□ -0.2
CSF1R-208ENST00000515239 SP2Q02086 613 aa13.83□□□□□ -0.2
CSF1R-208ENST00000515239 BTG3Q14201 252 aaPredicted RBP13.83□□□□□ -0.2
CSF1R-208ENST00000515239 ZMYM1Q5SVZ6 1142 aa13.83□□□□□ -0.2
CSF1R-208ENST00000515239 ARHGEF16Q5VV41 709 aa13.83□□□□□ -0.2
CSF1R-208ENST00000515239 TSHZ3Q63HK5 1081 aa13.83□□□□□ -0.2
CSF1R-208ENST00000515239 RBM23Q86U06 439 aaKnown RBP13.83□□□□□ -0.2
CSF1R-208ENST00000515239 SUSD6Q92537 303 aa13.83□□□□□ -0.2
CSF1R-208ENST00000515239 PPP2R3CQ969Q6 453 aa13.83□□□□□ -0.2
CSF1R-208ENST00000515239 CPVLQ9H3G5 476 aa13.83□□□□□ -0.2
CSF1R-208ENST00000515239 TUT1Q9H6E5 874 aaKnown RBP13.83□□□□□ -0.2
CSF1R-208ENST00000515239 SORBS3O60504 671 aa13.82□□□□□ -0.2
CSF1R-208ENST00000515239 KDM4AO75164 1064 aa13.82□□□□□ -0.2
CSF1R-208ENST00000515239 CHRNA1P02708 482 aa13.82□□□□□ -0.2
CSF1R-208ENST00000515239 EIF2AK2P19525 551 aaKnown RBP13.82□□□□□ -0.2
CSF1R-208ENST00000515239 FRMD5Q7Z6J6 570 aa13.82□□□□□ -0.2
CSF1R-208ENST00000515239 CRIPAKQ8N1N5 446 aa13.82□□□□□ -0.2
CSF1R-208ENST00000515239 TMEM105Q8N8V8 129 aa13.82□□□□□ -0.2
CSF1R-208ENST00000515239 UBA5Q9GZZ9 404 aa13.82□□□□□ -0.2
CSF1R-208ENST00000515239 EHMT1Q9H9B1 1298 aa13.82□□□□□ -0.2
CSF1R-208ENST00000515239 PXMP2Q9NR77 195 aa13.82□□□□□ -0.2
CSF1R-208ENST00000515239 MRPL42Q9Y6G3 142 aaKnown RBP13.82□□□□□ -0.2
CSF1R-208ENST00000515239 CACNA1BQ00975 2339 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 GGPS1O95749 300 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 GOLGA8HP0CJ92 632 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 ADAM17P78536 824 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 RBM10P98175 930 aaKnown RBP13.81□□□□□ -0.2
CSF1R-208ENST00000515239 NAALADL2Q58DX5 795 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 MCF2L2Q86YR7 1114 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 ADSSL1Q8N142 457 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 KLHL23Q8NBE8 558 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 ATP8B4Q8TF62 1192 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 NKD2Q969F2 451 aaPredicted RBP13.81□□□□□ -0.2
CSF1R-208ENST00000515239 TTC14Q96N46 770 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 BCAS3Q9H6U6 928 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 SETD4Q9NVD3 440 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 PCDHGC5Q9Y5F6 944 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 TTC3P53804 2025 aa13.81□□□□□ -0.2
CSF1R-208ENST00000515239 VPS13AQ96RL7 3174 aa13.8□□□□□ -0.2
CSF1R-208ENST00000515239 HSPD1P10809 573 aaKnown RBP13.8□□□□□ -0.2
CSF1R-208ENST00000515239 VPS53Q5VIR6 699 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms