RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 A0A1W2PQ45 241 aaPredicted RBP9.46□□□□□ -0.9
CCL28-204ENST00000514421 A0A1W2PQY0 241 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 MEIS1O00470 390 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 ADAMTS3O15072 1205 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 JAK2O60674 1132 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 GGPS1O95749 300 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 MBD3O95983 291 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 MYL3P08590 195 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 CDK7P50613 346 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 USP11P51784 963 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 RTP1P59025 263 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 ARHGAP4P98171 946 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 SP2Q02086 613 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 LRRC26Q2I0M4 334 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 CEP55Q53EZ4 464 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 CXCL17Q6UXB2 119 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 DAGLBQ8NCG7 672 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 AFG1LQ8WV93 481 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 SPATA33Q96N06 139 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 MTG1Q9BT17 334 aaPredicted RBP9.46□□□□□ -0.9
CCL28-204ENST00000514421 ALG1Q9BT22 464 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 PHF20Q9BVI0 1012 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 KCNJ14Q9UNX9 436 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 MCM3APO60318 1980 aa9.46□□□□□ -0.9
CCL28-204ENST00000514421 MKI67P46013 3256 aaKnown RBP9.45□□□□□ -0.9
CCL28-204ENST00000514421 A0A0U1RQG5 324 aaPredicted RBP9.45□□□□□ -0.9
CCL28-204ENST00000514421 ARVCFO00192 962 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 DTNBO60941 627 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 ATP9AO75110 1047 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 UBA1P22314 1058 aaKnown RBP9.45□□□□□ -0.9
CCL28-204ENST00000514421 CIITAP33076 1130 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 ZNF445P59923 1031 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 PURAQ00577 322 aaKnown RBP9.45□□□□□ -0.9
CCL28-204ENST00000514421 TLE2Q04725 743 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 SEMA3FQ13275 785 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 MTMR1Q13613 665 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 ITGA7Q13683 1181 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 TRIM29Q14134 588 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 SNX17Q15036 470 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 DGKDQ16760 1214 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 LARP1BQ659C4 914 aaKnown RBP9.45□□□□□ -0.9
CCL28-204ENST00000514421 METTL7BQ6UX53 244 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 CYFIP1Q7L576 1253 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 NIPA1Q7RTP0 329 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 PPTC7Q8NI37 304 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 CYP2W1Q8TAV3 490 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 RASGRP4Q8TDF6 673 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 CRYGNQ8WXF5 182 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 TOX2Q96NM4 488 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 KCNH7Q9NS40 1196 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 ATP11BQ9Y2G3 1177 aa9.45□□□□□ -0.9
CCL28-204ENST00000514421 DCDC2CA8MYV0 355 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 M0R2N6 131 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 PRPF40AO75400 957 aaKnown RBP9.44□□□□□ -0.9
CCL28-204ENST00000514421 MMP3P08254 477 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 ARP10275 920 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 KCNA2P16389 499 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 NPY5RQ15761 445 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 HSDL1Q3SXM5 330 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 ANKRD33Q7Z3H0 272 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 KRT25Q7Z3Z0 450 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 PLA2G4DQ86XP0 818 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 C7orf61Q8IZ16 206 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 FAM184AQ8NB25 1140 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 SLC43A3Q8NBI5 491 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 GPT2Q8TD30 523 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 TBCKQ8TEA7 893 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 ZSCAN16Q9H4T2 348 aaPredicted RBP9.44□□□□□ -0.9
CCL28-204ENST00000514421 BCAS3Q9H6U6 928 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 BRMS1Q9HCU9 246 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 GJB4Q9NTQ9 266 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 KIF3AQ9Y496 699 aa9.44□□□□□ -0.9
CCL28-204ENST00000514421 RBBP6Q7Z6E9 1792 aaKnown RBP9.43□□□□□ -0.9
CCL28-204ENST00000514421 GRIN2DO15399 1336 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 MROH7Q68CQ1 1323 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 CCDC194A0A1B0GVG4 234 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 FAM86B1E9PN63 330 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 H0YGN5 161 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 NOP56O00567 594 aaKnown RBP9.43□□□□□ -0.9
CCL28-204ENST00000514421 EDIL3O43854 480 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 SORBS3O60504 671 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 FAM86B2P0C5J1 330 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 HOXD8P13378 290 aaPredicted RBP9.43□□□□□ -0.9
CCL28-204ENST00000514421 PSMC6P62333 389 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 NONOQ15233 471 aaKnown RBP eCLIP9.43□□□□□ -0.9
CCL28-204ENST00000514421 SAFBQ15424 915 aaKnown RBP eCLIP9.43□□□□□ -0.9
CCL28-204ENST00000514421 CSPP1Q1MSJ5 1256 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 NBPF20Q3BBV1 942 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 TRIM60Q495X7 471 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 KRT40Q6A162 431 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 ATL3Q6DD88 541 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 SEPT1Q8WYJ6 367 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 KAT2BQ92831 832 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 GPR20Q99678 358 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 SDF4Q9BRK5 362 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 AGO4Q9HCK5 861 aaKnown RBP9.43□□□□□ -0.9
CCL28-204ENST00000514421 PRKAG2Q9UGJ0 569 aa9.43□□□□□ -0.9
CCL28-204ENST00000514421 NFASCO94856 1347 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 IGLV3-22A0A075B6J6 115 aa9.42□□□□□ -0.9
CCL28-204ENST00000514421 CYP3A7-CYP3A51PA0A087WV96 503 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms