RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ATP1A1P05023 1023 aaKnown RBP8.24□□□□□ -1.09
CLIP1-205ENST00000514271 NOVP48745 357 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 FXR2P51116 673 aaKnown RBP eCLIP8.24□□□□□ -1.09
CLIP1-205ENST00000514271 KRT31Q15323 416 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 CERKLQ49MI3 558 aaPredicted RBP8.24□□□□□ -1.09
CLIP1-205ENST00000514271 SH3BP5LQ7L8J4 393 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 ZNF444Q8N0Y2 327 aaPredicted RBP8.24□□□□□ -1.09
CLIP1-205ENST00000514271 VTI1AQ96AJ9 217 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 WRNIP1Q96S55 665 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 KLHL42Q9P2K6 505 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 MYO6Q9UM54 1294 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.24□□□□□ -1.09
CLIP1-205ENST00000514271 DDTLA6NHG4 134 aaPredicted RBP8.24□□□□□ -1.09
CLIP1-205ENST00000514271 BECN2A8MW95 431 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 ZNF213O14771 459 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 POLR3GO15318 223 aaPredicted RBP8.24□□□□□ -1.09
CLIP1-205ENST00000514271 KIF1CO43896 1103 aaKnown RBP8.24□□□□□ -1.09
CLIP1-205ENST00000514271 GGCXP38435 758 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 GNG11P61952 73 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 ITGB3BPQ13352 177 aaPredicted RBP8.24□□□□□ -1.09
CLIP1-205ENST00000514271 TRIM14Q14142 442 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 ABCB5Q2M3G0 1257 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 HAUS3Q68CZ6 603 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 GBP6Q6ZN66 633 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 TMTC1Q8IUR5 882 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 MAB21L3Q8N8X9 362 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 ANKS1AQ92625 1134 aa8.24□□□□□ -1.09
CLIP1-205ENST00000514271 DUSP9Q99956 384 aaKnown RBP8.24□□□□□ -1.09
CLIP1-205ENST00000514271 A0A0G2JMZ2 1700 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 ZNF233A6NK53 670 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 ZNF536O15090 1300 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 PLA2G6O60733 806 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 ASTN2O75129 1339 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-205ENST00000514271 ABCB11O95342 1321 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 TRDNQ13061 729 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 TRAF1Q13077 416 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 TCP11X2Q5H9J9 407 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 ZFYVE27Q5T4F4 411 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 NEDD1Q8NHV4 660 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 KCNV2Q8TDN2 545 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 ESR2Q92731 530 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 MYCBPQ99417 103 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-205ENST00000514271 NAPGQ99747 312 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-205ENST00000514271 KIAA1683Q9H0B3 1180 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 KIAA1522Q9P206 1035 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-205ENST00000514271 SIK3Q9Y2K2 1263 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 PCDHB6Q9Y5E3 794 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 SNCAIPQ9Y6H5 919 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 USP17L12C9JPN9 530 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 USP17L21D6R901 530 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 H3BQV1 296 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 CASP14P31944 242 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 CDK8P49336 464 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 ZNF157P51786 506 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-205ENST00000514271 POU5F1Q01860 360 aaKnown RBP8.23□□□□□ -1.09
CLIP1-205ENST00000514271 KCNB1Q14721 858 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 AKNAD1Q5T1N1 836 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 IFFO2Q5TF58 517 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 TTI2Q6NXR4 508 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 SYNE3Q6ZMZ3 975 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 C10orf67Q8IYJ2 551 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 ACRBPQ8NEB7 543 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 ZKSCAN4Q969J2 545 aaPredicted RBP8.23□□□□□ -1.09
CLIP1-205ENST00000514271 MKL1Q969V6 931 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 CAPNS2Q96L46 248 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 EPB41L4BQ9H329 900 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 VCPKMTQ9H867 229 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 CWC15Q9P013 229 aaKnown RBP8.23□□□□□ -1.09
CLIP1-205ENST00000514271 SERTAD1Q9UHV2 236 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 ZBTB21Q9ULJ3 1066 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 TRAF5O00463 557 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 MGRN1O60291 552 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 TCP10Q12799 353 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 SART3Q15020 963 aaKnown RBP8.23□□□□□ -1.09
CLIP1-205ENST00000514271 ADSSL1Q8N142 457 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 OTUD6BQ8N6M0 293 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 SELENOOQ9BVL4 669 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 MKNK2Q9HBH9 465 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 GOPCQ9HD26 462 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 TMOD4Q9NZQ9 345 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 VPS18Q9P253 973 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 TRIM10Q9UDY6 481 aa8.23□□□□□ -1.09
CLIP1-205ENST00000514271 A0A0G2JLL6 359 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-205ENST00000514271 NDUFA10O95299 355 aa8.22□□□□□ -1.09
CLIP1-205ENST00000514271 GNRH1P01148 92 aa8.22□□□□□ -1.09
CLIP1-205ENST00000514271 SHMT1P34896 483 aa8.22□□□□□ -1.09
CLIP1-205ENST00000514271 DRP2Q13474 957 aa8.22□□□□□ -1.09
CLIP1-205ENST00000514271 VGLL4Q14135 290 aa8.22□□□□□ -1.09
CLIP1-205ENST00000514271 TTC31Q49AM3 519 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-205ENST00000514271 HGSNATQ68CP4 663 aa8.22□□□□□ -1.09
CLIP1-205ENST00000514271 CDCA2Q69YH5 1023 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-205ENST00000514271 MFSD6Q6ZSS7 791 aa8.22□□□□□ -1.09
CLIP1-205ENST00000514271 GET4Q7L5D6 327 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-205ENST00000514271 PRRT2Q7Z6L0 340 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-205ENST00000514271 ZNF280CQ8ND82 737 aa8.22□□□□□ -1.09
CLIP1-205ENST00000514271 ERGIC2Q96RQ1 377 aa8.22□□□□□ -1.09
CLIP1-205ENST00000514271 CHP1Q99653 195 aa8.22□□□□□ -1.09
CLIP1-205ENST00000514271 SALL4Q9UJQ4 1053 aa8.22□□□□□ -1.09
CLIP1-205ENST00000514271 PCDHAC2Q9Y5I4 1007 aa8.22□□□□□ -1.09
CLIP1-205ENST00000514271 IGKV6D-41A0A0C4DH26 115 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms