RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 WDR81Q562E7 1941 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 KAT6AQ92794 2004 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 SPATA31C2B4DYI2 1134 aa9.35□□□□□ -0.91
NEDD4-210ENST00000513957 DYNC1LI2O43237 492 aaPredicted RBP9.35□□□□□ -0.91
NEDD4-210ENST00000513957 RGS20O76081 388 aa9.35□□□□□ -0.91
NEDD4-210ENST00000513957 HOXD8P13378 290 aaPredicted RBP9.35□□□□□ -0.91
NEDD4-210ENST00000513957 MRPS9P82933 396 aaKnown RBP9.35□□□□□ -0.91
NEDD4-210ENST00000513957 SETQ01105 290 aaPredicted RBP9.35□□□□□ -0.91
NEDD4-210ENST00000513957 STK3Q13188 491 aa9.35□□□□□ -0.91
NEDD4-210ENST00000513957 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
NEDD4-210ENST00000513957 DGKDQ16760 1214 aa9.35□□□□□ -0.91
NEDD4-210ENST00000513957 ME3Q16798 604 aa9.35□□□□□ -0.91
NEDD4-210ENST00000513957 ANKRD33Q7Z3H0 272 aa9.35□□□□□ -0.91
NEDD4-210ENST00000513957 IL31RAQ8NI17 732 aa9.35□□□□□ -0.91
NEDD4-210ENST00000513957 KATNAL1Q9BW62 490 aa9.35□□□□□ -0.91
NEDD4-210ENST00000513957 TANC1Q9C0D5 1861 aa9.35□□□□□ -0.91
NEDD4-210ENST00000513957 MYH9P35579 1960 aaKnown RBP9.35□□□□□ -0.91
NEDD4-210ENST00000513957 DNAH12Q6ZR08 3092 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 MYADML2A6NDP7 307 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 ARVCFO00192 962 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 ARIH2O95376 493 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 MMP3P08254 477 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 CYP3A4P08684 503 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 UBA1P22314 1058 aaKnown RBP9.34□□□□□ -0.91
NEDD4-210ENST00000513957 RTP1P59025 263 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 HMGN5P82970 282 aaKnown RBP9.34□□□□□ -0.91
NEDD4-210ENST00000513957 PURAQ00577 322 aaKnown RBP9.34□□□□□ -0.91
NEDD4-210ENST00000513957 PTPN11Q06124 597 aaPredicted RBP9.34□□□□□ -0.91
NEDD4-210ENST00000513957 ARHGAP1Q07960 439 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 MTMR1Q13613 665 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 UBE2SQ16763 222 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 LRRC26Q2I0M4 334 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 CELF3Q5SZQ8 465 aaKnown RBP9.34□□□□□ -0.91
NEDD4-210ENST00000513957 METTL7BQ6UX53 244 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 DHX37Q8IY37 1157 aaKnown RBP9.34□□□□□ -0.91
NEDD4-210ENST00000513957 SLC43A3Q8NBI5 491 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 CRYGNQ8WXF5 182 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 POM121Q96HA1 1249 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 DCBLD2Q96PD2 775 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 MTG1Q9BT17 334 aaPredicted RBP9.34□□□□□ -0.91
NEDD4-210ENST00000513957 BACH2Q9BYV9 841 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 BRMS1Q9HCU9 246 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 JADE2Q9NQC1 790 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 VPS54Q9P1Q0 977 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 PRKAG2Q9UGJ0 569 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 PCDHA4Q9UN74 947 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 UBIAD1Q9Y5Z9 338 aa9.34□□□□□ -0.91
NEDD4-210ENST00000513957 DCDC2CA8MYV0 355 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 TLR3O15455 904 aaKnown RBP9.33□□□□□ -0.92
NEDD4-210ENST00000513957 PPFIA4O75335 1185 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 GGPS1O95749 300 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 F2P00734 622 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 CDK7P50613 346 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 USP11P51784 963 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 NLRP5P59047 1200 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 ARHGAP4P98171 946 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 LY6KQ17RY6 165 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 CEP55Q53EZ4 464 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 MYSM1Q5VVJ2 828 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 NFRKBQ6P4R8 1299 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 MOXD1Q6UVY6 613 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 CXCL17Q6UXB2 119 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 SESTD1Q86VW0 696 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 NSUN7Q8NE18 718 aaKnown RBP9.33□□□□□ -0.92
NEDD4-210ENST00000513957 MXRA8Q9BRK3 442 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 ORC3Q9UBD5 711 aaPredicted RBP9.33□□□□□ -0.92
NEDD4-210ENST00000513957 KIF3AQ9Y496 699 aa9.33□□□□□ -0.92
NEDD4-210ENST00000513957 DDX49Q9Y6V7 483 aaKnown RBP9.33□□□□□ -0.92
NEDD4-210ENST00000513957 NFASCO94856 1347 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 A0A1W2PPC1 479 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 M0R2N6 131 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 MEIS1O00470 390 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 NOP56O00567 594 aaKnown RBP9.32□□□□□ -0.92
NEDD4-210ENST00000513957 CTDNEP1O95476 244 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 CLTBP09497 229 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 SUPT20HL2P0C7V6 817 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 ITGB5P18084 799 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 CIITAP33076 1130 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 ATN1P54259 1190 aaPredicted RBP9.32□□□□□ -0.92
NEDD4-210ENST00000513957 BEX3Q00994 111 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 ITGA7Q13683 1181 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 TRIM29Q14134 588 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 TRIM60Q495X7 471 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 KRT25Q7Z3Z0 450 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 C7orf61Q8IZ16 206 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 BLIDQ8IZY5 108 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 AFG1LQ8WV93 481 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 FERMT2Q96AC1 680 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 SPATA33Q96N06 139 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 NAP1L4Q99733 375 aaKnown RBP9.32□□□□□ -0.92
NEDD4-210ENST00000513957 ALG1Q9BT22 464 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 PHF20Q9BVI0 1012 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 MLXIPQ9HAP2 919 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 ATP11BQ9Y2G3 1177 aa9.32□□□□□ -0.92
NEDD4-210ENST00000513957 KIAA0355O15063 1070 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 LARGE1O95461 756 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 MYL3P08590 195 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 KCNA2P16389 499 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 BMP8BP34820 402 aa9.31□□□□□ -0.92
NEDD4-210ENST00000513957 ZNF76P36508 570 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms