RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 ZNF165P49910 485 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 POSTNQ15063 836 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 UBE2SQ16763 222 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 SPECC1Q5M775 1068 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 HYIQ5T013 277 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 KRT79Q5XKE5 535 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 CCDC174Q6PII3 467 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 Q6ZNB5 142 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 GPIHBP1Q8IV16 184 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 CLEC4DQ8WXI8 215 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 PAGE5Q96GU1 130 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 AGBL1Q96MI9 1066 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 TRERF1Q96PN7 1200 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 TEX13BQ9BXU2 312 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 DISC1Q9NRI5 854 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 STK17AQ9UEE5 414 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 FBXO40Q9UH90 709 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 SERTAD1Q9UHV2 236 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 SLC45A1Q9Y2W3 748 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 PCDHA5Q9Y5H7 936 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 MRVI1Q9Y6F6 885 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 DOCK1Q14185 1865 aa11.12□□□□□ -0.63
TPM3-221ENST00000513769 SLC25A27O95847 323 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 SNAP25P60880 206 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 SETQ01105 290 aaPredicted RBP11.11□□□□□ -0.63
TPM3-221ENST00000513769 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
TPM3-221ENST00000513769 CEP55Q53EZ4 464 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 MAP1SQ66K74 1059 aaPredicted RBP11.11□□□□□ -0.63
TPM3-221ENST00000513769 CNNM4Q6P4Q7 775 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 USP49Q70CQ1 688 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 CCDC84Q86UT8 332 aaPredicted RBP11.11□□□□□ -0.63
TPM3-221ENST00000513769 CABP7Q86V35 215 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 CPXCR1Q8N123 301 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 C2orf69Q8N8R5 385 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 REPS2Q8NFH8 660 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 ERMNQ8TAM6 284 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 HAS1Q92839 578 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 SMARCE1Q969G3 411 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 RIT2Q99578 217 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 PANK2Q9BZ23 570 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 KBTBD4Q9NVX7 518 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 RMND1Q9NWS8 449 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.11□□□□□ -0.63
TPM3-221ENST00000513769 SSC5DA1L4H1 1573 aa11.11□□□□□ -0.63
TPM3-221ENST00000513769 LOC102724159A0A0B4J2E5 919 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 B4DLN1 442 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 IKBKBO14920 756 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 TDP2O95551 362 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 ALAS1P13196 640 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 ERCC5P28715 1186 aaPredicted RBP11.1□□□□□ -0.63
TPM3-221ENST00000513769 PPP1R2P41236 205 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 MAP2K1Q02750 393 aaPredicted RBP11.1□□□□□ -0.63
TPM3-221ENST00000513769 SNAPC2Q13487 334 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 PRKG1Q13976 671 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 PWP2Q15269 919 aaKnown RBP11.1□□□□□ -0.63
TPM3-221ENST00000513769 ANO6Q4KMQ2 910 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 PCNX4Q63HM2 1172 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 RNF207Q6ZRF8 634 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.1□□□□□ -0.63
TPM3-221ENST00000513769 DNERQ8NFT8 737 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 TBC1D5Q92609 795 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 CCDC47Q96A33 483 aaKnown RBP11.1□□□□□ -0.63
TPM3-221ENST00000513769 DHX58Q96C10 678 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 PPP1R9BQ96SB3 815 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 IWS1Q96ST2 819 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 C7orf25Q9BPX7 421 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 MXRA8Q9BRK3 442 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 TMUB1Q9BVT8 246 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 RAVER2Q9HCJ3 691 aaKnown RBP11.1□□□□□ -0.63
TPM3-221ENST00000513769 ZNF214Q9UL59 606 aaPredicted RBP11.1□□□□□ -0.63
TPM3-221ENST00000513769 ABT1Q9ULW3 272 aaKnown RBP11.1□□□□□ -0.63
TPM3-221ENST00000513769 AGTPBP1Q9UPW5 1226 aa11.1□□□□□ -0.63
TPM3-221ENST00000513769 RPTORQ8N122 1335 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 IGLV3-22A0A075B6J6 115 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 PVALEFA0A1B0GWK0 134 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 RASSF10A6NK89 507 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 BECN2A8MW95 431 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 GOLGA6L19H0YKK7 550 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 SLC37A4O43826 429 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 RPA1P27694 616 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 HOXA13P31271 388 aaPredicted RBP11.09□□□□□ -0.63
TPM3-221ENST00000513769 STAT6P42226 847 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 GTF2A2P52657 109 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 TPM4P67936 248 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 CCDC173Q0VFZ6 552 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 DPYDQ12882 1025 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 MORC3Q14149 939 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 KCNB1Q14721 858 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 TMEM132BQ14DG7 1078 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 PRR16Q569H4 304 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 HAUS3Q68CZ6 603 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 PDXDC2PQ6P474 469 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 SV2BQ7L1I2 683 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 FCHSD1Q86WN1 690 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 RIOX2Q8IUF8 465 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 PDILTQ8N807 584 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 ETNPPLQ8TBG4 499 aa11.09□□□□□ -0.63
TPM3-221ENST00000513769 SYTL5Q8TDW5 730 aaPredicted RBP11.09□□□□□ -0.63
TPM3-221ENST00000513769 NSUN6Q8TEA1 469 aaKnown RBP11.09□□□□□ -0.63
TPM3-221ENST00000513769 NLRP7Q8WX94 980 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms