RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 CEP290O15078 2479 aa11.75□□□□□ -0.53
PTPN20-227ENST00000513159 GSTTP1A0A1W2PQM5 241 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 A6NJR5 290 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 MAFGO15525 162 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 MSCO60682 206 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 CCNE2O96020 404 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 GH1P01241 217 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 HOXD8P13378 290 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-227ENST00000513159 ATP2B1P20020 1258 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 CST5P28325 142 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-227ENST00000513159 ZNF76P36508 570 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 SOX10P56693 466 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 GNPTABQ3T906 1256 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 CYFIP1Q7L576 1253 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 OR6J1Q8NGC5 347 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 AFG1LQ8WV93 481 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 SLC5A5Q92911 643 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 MTMR9Q96QG7 549 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.74□□□□□ -0.53
PTPN20-227ENST00000513159 DDX25Q9UHL0 483 aaKnown RBP11.74□□□□□ -0.53
PTPN20-227ENST00000513159 EVPLQ92817 2033 aa11.74□□□□□ -0.53
PTPN20-227ENST00000513159 CCDC85CA6NKD9 419 aa11.73□□□□□ -0.53
PTPN20-227ENST00000513159 IPO5O00410 1097 aaKnown RBP11.73□□□□□ -0.53
PTPN20-227ENST00000513159 NKRFO15226 690 aaKnown RBP eCLIP11.73□□□□□ -0.53
PTPN20-227ENST00000513159 CCNT1O60563 726 aaKnown RBP11.73□□□□□ -0.53
PTPN20-227ENST00000513159 PSMD10O75832 226 aa11.73□□□□□ -0.53
PTPN20-227ENST00000513159 NFASCO94856 1347 aa11.73□□□□□ -0.53
PTPN20-227ENST00000513159 BRD1O95696 1058 aa11.73□□□□□ -0.53
PTPN20-227ENST00000513159 HSP90AA1P07900 732 aaKnown RBP11.73□□□□□ -0.53
PTPN20-227ENST00000513159 COL6A1P12109 1028 aa11.73□□□□□ -0.53
PTPN20-227ENST00000513159 ZNF174Q15697 407 aa11.73□□□□□ -0.53
PTPN20-227ENST00000513159 TTC38Q5R3I4 469 aa11.73□□□□□ -0.53
PTPN20-227ENST00000513159 FOXD4L5Q5VV16 416 aaPredicted RBP11.73□□□□□ -0.53
PTPN20-227ENST00000513159 KCNV1Q6PIU1 500 aa11.73□□□□□ -0.53
PTPN20-227ENST00000513159 FOXD4L4Q8WXT5 416 aaPredicted RBP11.73□□□□□ -0.53
PTPN20-227ENST00000513159 CHAMP1Q96JM3 812 aa11.73□□□□□ -0.53
PTPN20-227ENST00000513159 PCYT2Q99447 389 aa11.73□□□□□ -0.53
PTPN20-227ENST00000513159 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
PTPN20-227ENST00000513159 FTOQ9C0B1 505 aaKnown RBP eCLIP11.73□□□□□ -0.53
PTPN20-227ENST00000513159 GRIN2DO15399 1336 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 ATG7O95352 703 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 TFRCP02786 760 aaKnown RBP11.72□□□□□ -0.53
PTPN20-227ENST00000513159 MMP3P08254 477 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 C6orf222P0C671 652 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-227ENST00000513159 ZSCAN22P10073 491 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-227ENST00000513159 GCFC2P16383 781 aaKnown RBP11.72□□□□□ -0.53
PTPN20-227ENST00000513159 MCM7P33993 719 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 TRAPPC10P48553 1259 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 SETQ01105 290 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-227ENST00000513159 SPIRE1Q08AE8 756 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 LAMC2Q13753 1193 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 NEDD9Q14511 834 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 KCNA10Q16322 511 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 FSCN1Q16658 493 aaKnown RBP11.72□□□□□ -0.53
PTPN20-227ENST00000513159 METTL7BQ6UX53 244 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 DHX37Q8IY37 1157 aaKnown RBP11.72□□□□□ -0.53
PTPN20-227ENST00000513159 KAT2BQ92831 832 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 CDHR1Q96JP9 859 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 GPR20Q99678 358 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 ZNF577Q9BSK1 485 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 VAV3Q9UKW4 847 aa11.72□□□□□ -0.53
PTPN20-227ENST00000513159 DDX39AO00148 427 aaKnown RBP11.71□□□□□ -0.53
PTPN20-227ENST00000513159 EML1O00423 815 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 DNM1LO00429 736 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 F13A1P00488 732 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 PURAQ00577 322 aaKnown RBP11.71□□□□□ -0.53
PTPN20-227ENST00000513159 SP4Q02446 784 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 GNL2Q13823 731 aaKnown RBP11.71□□□□□ -0.53
PTPN20-227ENST00000513159 PTPAQ15257 358 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 IL17AQ16552 155 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 GNASQ5JWF2 1037 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 BRAPQ7Z569 592 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 PPTC7Q8NI37 304 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 PPP1R13LQ8WUF5 828 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 SPATA33Q96N06 139 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 C16orf70Q9BSU1 422 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 AP5M1Q9H0R1 490 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 UNC45AQ9H3U1 944 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 SLC9A2Q9UBY0 812 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 PHF24Q9UPV7 400 aa11.71□□□□□ -0.53
PTPN20-227ENST00000513159 IGKV6D-21A0A0A0MT36 114 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 TBX3O15119 743 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 NEMFO60524 1076 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 ASGR1P07306 291 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 ANP32AP39687 249 aaKnown RBP11.7□□□□□ -0.54
PTPN20-227ENST00000513159 ACLYP53396 1101 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 ACTR2P61160 394 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 RILPL1Q5EBL4 403 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 LRCH2Q5VUJ6 765 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 CXCL17Q6UXB2 119 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 ABHD15Q6UXT9 468 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 TRIM50Q86XT4 487 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 ANKLE1Q8NAG6 615 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 ARRDC4Q8NCT1 418 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 FERMT2Q96AC1 680 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 PAWRQ96IZ0 340 aaKnown RBP11.7□□□□□ -0.54
PTPN20-227ENST00000513159 USP28Q96RU2 1077 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 RIT2Q99578 217 aa11.7□□□□□ -0.54
PTPN20-227ENST00000513159 TSEN34Q9BSV6 310 aaKnown RBP11.7□□□□□ -0.54
PTPN20-227ENST00000513159 MLXIPQ9HAP2 919 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms