RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 A0A0D9SFI3 127 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 FGD1P98174 961 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 DNM1Q05193 864 aaKnown RBP11.12□□□□□ -0.63
TRIO-220ENST00000512979 ALX1Q15699 326 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 RTN1Q16799 776 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 C11orf91Q3C1V1 193 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 RRP12Q5JTH9 1297 aaKnown RBP11.12□□□□□ -0.63
TRIO-220ENST00000512979 C1orf53Q5VUE5 145 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 MAMDC4Q6UXC1 1216 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 KCTD1Q719H9 257 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 Q7L0L9 218 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 ZNF295-AS1Q8N0V1 137 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 DEFB123Q8N688 67 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 ALKBH8Q96BT7 664 aaKnown RBP11.12□□□□□ -0.63
TRIO-220ENST00000512979 NIF3L1Q9GZT8 377 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 ACAD9Q9H845 621 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 PDLIM7Q9NR12 457 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 TOMM22Q9NS69 142 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 KLK14Q9P0G3 267 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 FAM184BQ9ULE4 1060 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 TACC3Q9Y6A5 838 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 SMCHD1A6NHR9 2005 aa11.12□□□□□ -0.63
TRIO-220ENST00000512979 SYNRGQ9UMZ2 1314 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 PLXNA1Q9UIW2 1896 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 A0A1W2PQ45 241 aaPredicted RBP11.11□□□□□ -0.63
TRIO-220ENST00000512979 A0A1W2PQY0 241 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 MEN1O00255 615 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 SCAMP3O14828 347 aaKnown RBP11.11□□□□□ -0.63
TRIO-220ENST00000512979 ORC4O43929 436 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 ADAMTS4O75173 837 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 FGAP02671 866 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 PTGIRP43119 386 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 TLE2Q04725 743 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 NMIQ13287 307 aaPredicted RBP11.11□□□□□ -0.63
TRIO-220ENST00000512979 ACVR2BQ13705 512 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 CCDC96Q2M329 555 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 RCSD1Q6JBY9 416 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 CCDC174Q6PII3 467 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 POTEGQ6S5H5 508 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 ARMCX2Q7L311 632 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 RASGRP2Q7LDG7 609 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 ZNF589Q86UQ0 364 aaPredicted RBP11.11□□□□□ -0.63
TRIO-220ENST00000512979 EDEM1Q92611 657 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 RILPL2Q969X0 211 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 FGD4Q96M96 766 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 AGBL1Q96MI9 1066 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 RWDD1Q9H446 243 aaPredicted RBP11.11□□□□□ -0.63
TRIO-220ENST00000512979 RNF146Q9NTX7 359 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 WASF2Q9Y6W5 498 aa11.11□□□□□ -0.63
TRIO-220ENST00000512979 ZNF536O15090 1300 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 TRIM43BA6NCK2 446 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 PLA2G6O60733 806 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 PQBP1O60828 265 aaKnown RBP11.1□□□□□ -0.63
TRIO-220ENST00000512979 DUSP11O75319 330 aaKnown RBP11.1□□□□□ -0.63
TRIO-220ENST00000512979 FGRP09769 529 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 HSPD1P10809 573 aaKnown RBP11.1□□□□□ -0.63
TRIO-220ENST00000512979 ALAS1P13196 640 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 MZF1P28698 734 aaPredicted RBP11.1□□□□□ -0.63
TRIO-220ENST00000512979 ERCC5P28715 1186 aaPredicted RBP11.1□□□□□ -0.63
TRIO-220ENST00000512979 SNAP25P60880 206 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 HAND2P61296 217 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 CNTN2Q02246 1040 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 TKFCQ3LXA3 575 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 TICAM2Q86XR7 235 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 SMC5Q8IY18 1101 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 CCDC144CPQ8IYA2 1237 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 GJD3Q8N144 294 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 KLHDC9Q8NEP7 349 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 DCAF4Q8WV16 495 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 BADQ92934 168 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 RNF166Q96A37 237 aaPredicted RBP11.1□□□□□ -0.63
TRIO-220ENST00000512979 TRIM43Q96BQ3 446 aaPredicted RBP11.1□□□□□ -0.63
TRIO-220ENST00000512979 IFT43Q96FT9 208 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 TRERF1Q96PN7 1200 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 TSEN34Q9BSV6 310 aaKnown RBP11.1□□□□□ -0.63
TRIO-220ENST00000512979 PHACTR1Q9C0D0 580 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 ABHD16BQ9H3Z7 469 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 A1CFQ9NQ94 594 aaKnown RBP11.1□□□□□ -0.63
TRIO-220ENST00000512979 STARD7Q9NQZ5 370 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 PRR12Q9ULL5 1215 aa11.1□□□□□ -0.63
TRIO-220ENST00000512979 CCDC171Q6TFL3 1326 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 MYADML2A6NDP7 307 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 CLTBP09497 229 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 C6orf222P0C671 652 aaPredicted RBP11.09□□□□□ -0.63
TRIO-220ENST00000512979 NOVP48745 357 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 ACLYP53396 1101 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 KCNA10Q16322 511 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 CCDC144BQ3MJ40 725 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 Q6ZVU0 165 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 CHD1LQ86WJ1 897 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 FAM133AQ8N9E0 248 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 NUP133Q8WUM0 1156 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 ITPKCQ96DU7 683 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 TMEM47Q9BQJ4 181 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 SPC25Q9HBM1 224 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 CCPG1Q9ULG6 757 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 ZMYM6O95789 1325 aa11.09□□□□□ -0.63
TRIO-220ENST00000512979 PNMA6FA0A0J9YX94 578 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 ADCY6O43306 1168 aa11.08□□□□□ -0.64
TRIO-220ENST00000512979 IGHDP01880 384 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms