RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 LBX2Q6XYB7 198 aa3.74□□□□□ -1.81
PDGFC-208ENST00000512711 ZCCHC14Q8WYQ9 949 aaKnown RBP3.74□□□□□ -1.81
PDGFC-208ENST00000512711 BORCS6Q96GS4 357 aa3.74□□□□□ -1.81
PDGFC-208ENST00000512711 SGSM3Q96HU1 749 aa3.74□□□□□ -1.81
PDGFC-208ENST00000512711 KRTAP3-1Q9BYR8 98 aa3.74□□□□□ -1.81
PDGFC-208ENST00000512711 EPB41L1Q9H4G0 881 aa3.74□□□□□ -1.81
PDGFC-208ENST00000512711 PCDH18Q9HCL0 1135 aa3.74□□□□□ -1.81
PDGFC-208ENST00000512711 TCRBV5S4A2TA0A5A2 114 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 PLATP00750 562 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 CKMP06732 381 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 FGFR1P11362 822 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 COL6A1P12109 1028 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 MAGEA10P43363 369 aaPredicted RBP3.73□□□□□ -1.81
PDGFC-208ENST00000512711 TUSC3Q13454 348 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 PUM1Q14671 1186 aaKnown RBP eCLIP3.73□□□□□ -1.81
PDGFC-208ENST00000512711 SPATS1Q496A3 300 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 FAM26FQ5R3K3 315 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 ERICH6BQ5W0A0 696 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 OTOP3Q7RTS5 596 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 LCORQ96JN0 433 aaPredicted RBP3.73□□□□□ -1.81
PDGFC-208ENST00000512711 YTHDC1Q96MU7 727 aaKnown RBP3.73□□□□□ -1.81
PDGFC-208ENST00000512711 AARSD1Q9BTE6 412 aaKnown RBP3.73□□□□□ -1.81
PDGFC-208ENST00000512711 PPP4R1LQ9P1A2 415 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 ZDHHC9Q9Y397 364 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 TRAF6Q9Y4K3 522 aa3.73□□□□□ -1.81
PDGFC-208ENST00000512711 ACOT7O00154 380 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 ADCY3O60266 1144 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 B4GALT4O60513 344 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 CYP1A1P04798 512 aaPredicted RBP3.72□□□□□ -1.81
PDGFC-208ENST00000512711 CHRNA2Q15822 529 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 HABP4Q5JVS0 413 aaKnown RBP3.72□□□□□ -1.81
PDGFC-208ENST00000512711 FAM209AQ5JX71 171 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 RSPO2Q6UXX9 243 aaPredicted RBP3.72□□□□□ -1.81
PDGFC-208ENST00000512711 LGI4Q8N135 537 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 NUDT10Q8NFP7 164 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 IGDCC4Q8TDY8 1250 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 SH3RF2Q8TEC5 729 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 DCAF4Q8WV16 495 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 NUDT11Q96G61 164 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 C8orf49Q96NF6 230 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 IPPKQ9H8X2 491 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 L2HGDHQ9H9P8 463 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 NGRNQ9NPE2 291 aaKnown RBP3.72□□□□□ -1.81
PDGFC-208ENST00000512711 SMPD4Q9NXE4 827 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 PFDN2Q9UHV9 154 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 ST6GALNAC2Q9UJ37 374 aa3.72□□□□□ -1.81
PDGFC-208ENST00000512711 ZNF536O15090 1300 aa3.71□□□□□ -1.81
PDGFC-208ENST00000512711 CCDC85CA6NKD9 419 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 DIAPH1O60610 1272 aaKnown RBP3.71□□□□□ -1.82
PDGFC-208ENST00000512711 SOD2P04179 222 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 GRK2P25098 689 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 GRK3P35626 688 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 GLRBP48167 497 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 ADAM17P78536 824 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 STYK1Q6J9G0 422 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 TRMT10BQ6PF06 316 aaKnown RBP3.71□□□□□ -1.82
PDGFC-208ENST00000512711 ST13P5Q8NFI4 369 aaPredicted RBP3.71□□□□□ -1.82
PDGFC-208ENST00000512711 PHOSPHO1Q8TCT1 267 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 LOXL4Q96JB6 756 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 CLIC6Q96NY7 704 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 CD244Q9BZW8 370 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 TMEM168Q9H0V1 697 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 HSPBP1Q9NZL4 362 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 MSRB2Q9Y3D2 182 aa3.71□□□□□ -1.82
PDGFC-208ENST00000512711 TRAV20A0A0B4J274 112 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 IQCA1LA6NCM1 817 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 C9orf118A6NHY6 69 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 KRIT1O00522 736 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 GPR42O15529 346 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 KLHL18O94889 574 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 IL18BPO95998 194 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 FAM153BP0C7A2 387 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 GNAT1P11488 350 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 FAHP16930 419 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 GPR85P60893 370 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 PFKPQ01813 784 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 IFRD2Q12894 506 aaPredicted RBP3.7□□□□□ -1.82
PDGFC-208ENST00000512711 ICAM4Q14773 271 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 ZNF827Q17R98 1081 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 SKIDA1Q1XH10 827 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 PAN2Q504Q3 1202 aaKnown RBP3.7□□□□□ -1.82
PDGFC-208ENST00000512711 NAALADL2Q58DX5 795 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 FAM124AQ86V42 546 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 OSTM1Q86WC4 334 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 TRIM48Q8IWZ4 208 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 KBTBD2Q8IY47 623 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 IFNL3Q8IZI9 196 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 STPG3Q8N7X2 389 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 DTX3Q8N9I9 347 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 UHMK1Q8TAS1 419 aaKnown RBP3.7□□□□□ -1.82
PDGFC-208ENST00000512711 WWC2-AS2Q96NR7 200 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 GPR20Q99678 358 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 SPATA9Q9BWV2 254 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 CNOT11Q9UKZ1 510 aaKnown RBP3.7□□□□□ -1.82
PDGFC-208ENST00000512711 DSEQ9UL01 958 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 PCDHA8Q9Y5H6 950 aa3.7□□□□□ -1.82
PDGFC-208ENST00000512711 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.69□□□□□ -1.82
PDGFC-208ENST00000512711 FAM221BA6H8Z2 402 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 FAM90A27PA6NNH2 459 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 E9PSI1 815 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms