RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 IFT20Q8IY31 132 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 GPR161Q8N6U8 529 aaKnown RBP14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 RTFDC1Q9BY42 306 aaPredicted RBP14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 RNF146Q9NTX7 359 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 CNOT7Q9UIV1 285 aaKnown RBP14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 TLDC2A0PJX2 215 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 SOWAHDA6NJG2 315 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 FDX1P10109 184 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 DPEP1P16444 411 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 SLC8A3P57103 927 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 DEFB132Q7Z7B7 95 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 LDHDQ86WU2 507 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 KLHL7Q8IXQ5 586 aa14.35□□□□□ -0.11
PCDHA4-202ENST00000512229 FAM170AA1A519 330 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 PSMD14O00487 310 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 ACTN4O43707 911 aaKnown RBP14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 NFIAQ12857 509 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 SLC35F6Q8N357 371 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 ENGASEQ8NFI3 743 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 CCDC114Q96M63 670 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 JPH2Q9BR39 696 aaPredicted RBP14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 FAM107BQ9H098 131 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 HYOU1Q9Y4L1 999 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 NTRK3Q16288 839 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 SNRNP48Q6IEG0 339 aaKnown RBP14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 PTF1AQ7RTS3 328 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 DAAM2Q86T65 1068 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 DHX40Q8IX18 779 aaKnown RBP14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 PCIF1Q9H4Z3 704 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 TBC1D22BQ9NU19 505 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 ANKFY1Q9P2R3 1169 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 NRXN3Q9Y4C0 1643 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 BAZ2BQ9UIF8 2168 aaKnown RBP14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 SLIT3O75094 1523 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 EFCAB8A8MWE9 144 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 IPO5O00410 1097 aaKnown RBP14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 PSAPP07602 524 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 PRELPP51888 382 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 MYL7Q01449 175 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 RASSF7Q02833 373 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 MTERF2Q49AM1 385 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 CCDC170Q8IYT3 715 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 SLC10A4Q96EP9 437 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 ADPGKQ9BRR6 497 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 CDC23Q9UJX2 597 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 POTEFA5A3E0 1075 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 MFAP3LO75121 409 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 POTEIP0CG38 1075 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 IL1R1P14778 569 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 FERP16591 822 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 POTEGQ6S5H5 508 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 POTEEQ6S8J3 1075 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 MICALL2Q8IY33 904 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 GUF1Q8N442 669 aaKnown RBP14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 NSUN6Q8TEA1 469 aaKnown RBP14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 TUBE1Q9UJT0 475 aa14.34□□□□□ -0.11
PCDHA4-202ENST00000512229 LGALS16A8MUM7 142 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 NDUFA10O95299 355 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 R3HDM1Q15032 1099 aaKnown RBP14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 TRERF1Q96PN7 1200 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 TRIM9Q9C026 710 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 JMJD4Q9H9V9 463 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 VPS18Q9P253 973 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 FBXO40Q9UH90 709 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 PALM3A6NDB9 673 aaPredicted RBP14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 WTIPA6NIX2 430 aaPredicted RBP14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 POLRMTO00411 1230 aaKnown RBP14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 KCNK3O14649 394 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 EZRP15311 586 aaKnown RBP14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 IGBP1P78318 339 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 KCNB1Q14721 858 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 CCDC144BQ3MJ40 725 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 CEP55Q53EZ4 464 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 SFR1Q86XK3 245 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 PROM2Q8N271 834 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 ARFGAP2Q8N6H7 521 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 ACRBPQ8NEB7 543 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 NT5C1BQ96P26 610 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 SPC25Q9HBM1 224 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 KIF13AQ9H1H9 1805 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 ZDHHC15Q96MV8 337 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 TRIM31Q9BZY9 425 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 POLD4Q9HCU8 107 aa14.33□□□□□ -0.12
PCDHA4-202ENST00000512229 WDR64B1ANS9 1081 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 TMEM191BP0C7N4 346 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 ST3GAL1Q11201 340 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 CCDC91Q7Z6B0 441 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 PRR12Q9ULL5 1215 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 AGTPBP1Q9UPW5 1226 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 USTQ9Y2C2 406 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 UTP11Q9Y3A2 253 aaKnown RBP14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 INO80B-WBP1J3KQ70 363 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 HOXA10P31260 410 aaPredicted RBP14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 STAT3P40763 770 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 YWHAEP62258 255 aaKnown RBP14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 COASYQ13057 564 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 ZNF365Q70YC5 407 aa14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 INO80BQ9C086 356 aaPredicted RBP14.32□□□□□ -0.12
PCDHA4-202ENST00000512229 VCPKMTQ9H867 229 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms