RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 AFG3L2Q9Y4W6 797 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 MRVI1Q9Y6F6 885 aa9.11□□□□□ -0.95
HTT-209ENST00000512068 PARP14Q460N5 1801 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 MYPNQ86TC9 1320 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 PTPRFP10586 1907 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 BECN2A8MW95 431 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 CXCL11O14625 94 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 MEIS2O14770 477 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 TDP2O95551 362 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 HOXA13P31271 388 aaPredicted RBP9.1□□□□□ -0.95
HTT-209ENST00000512068 SREBF1P36956 1147 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 TECP42680 631 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 OAZ1P54368 228 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 GRIN1Q05586 938 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 PLS1Q14651 629 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 POSTNQ15063 836 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 UVSSAQ2YD98 709 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 TKFCQ3LXA3 575 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 ANO6Q4KMQ2 910 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 RRAGBQ5VZM2 374 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 KRT79Q5XKE5 535 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.1□□□□□ -0.95
HTT-209ENST00000512068 FASTKD5Q7L8L6 764 aaKnown RBP9.1□□□□□ -0.95
HTT-209ENST00000512068 CABP7Q86V35 215 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 ERMNQ8TAM6 284 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 FAM200AQ8TCP9 573 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 SMARCE1Q969G3 411 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 ATG4CQ96DT6 458 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 EPSTI1Q96J88 318 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 AGBL1Q96MI9 1066 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 PANK2Q9BZ23 570 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 RBSNQ9H1K0 784 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 TMEM60Q9H2L4 133 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 MAGEF1Q9HAY2 307 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 HOMER2Q9NSB8 354 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 MAP3K20Q9NYL2 800 aaKnown RBP9.1□□□□□ -0.95
HTT-209ENST00000512068 PLA2G2EQ9NZK7 142 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 TCEAL9Q9UHQ7 104 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 SERTAD1Q9UHV2 236 aa9.1□□□□□ -0.95
HTT-209ENST00000512068 COL11A1P12107 1806 aaPredicted RBP9.1□□□□□ -0.95
HTT-209ENST00000512068 PAPPA2Q9BXP8 1791 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 KDM3AQ9Y4C1 1321 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 UNCXA6NJT0 531 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 VWA5AO00534 786 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 SLFN14P0C7P3 912 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 SETQ01105 290 aaPredicted RBP9.09□□□□□ -0.95
HTT-209ENST00000512068 PPIL2Q13356 520 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 DGKZQ13574 1117 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 LONRF3Q496Y0 759 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 PRR16Q569H4 304 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 HAUS3Q68CZ6 603 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 SNRNP48Q6IEG0 339 aaKnown RBP9.09□□□□□ -0.95
HTT-209ENST00000512068 CATSPERGQ6ZRH7 1159 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 C4orf32Q8N8J7 132 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 C2orf69Q8N8R5 385 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 SLC10A4Q96EP9 437 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 TRERF1Q96PN7 1200 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 CCSER1Q9C0I3 900 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 CUEDC2Q9H467 287 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 RRAGCQ9HB90 399 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 DISC1Q9NRI5 854 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 RNF146Q9NTX7 359 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 LRWD1Q9UFC0 647 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 LOC285556D6RIA3 1793 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 GOLGB1Q14789 3259 aaKnown RBP9.09□□□□□ -0.95
HTT-209ENST00000512068 SMCHD1A6NHR9 2005 aa9.09□□□□□ -0.95
HTT-209ENST00000512068 BIN1O00499 593 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 TBX3O15119 743 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 SLC37A4O43826 429 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 TAL1P17542 331 aaPredicted RBP9.08□□□□□ -0.96
HTT-209ENST00000512068 AFMP43652 599 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 ZNF165P49910 485 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 NLRP12P59046 1061 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 FKBP1BP68106 108 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 AMPD3Q01432 767 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 SNAPC2Q13487 334 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 PNOCQ13519 176 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 KARSQ15046 597 aaKnown RBP9.08□□□□□ -0.96
HTT-209ENST00000512068 Q4G0T1 1027 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 MAP1SQ66K74 1059 aaPredicted RBP9.08□□□□□ -0.96
HTT-209ENST00000512068 NSMFQ6X4W1 530 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 RNF207Q6ZRF8 634 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 MB21D1Q8N884 522 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 SNX29Q8TEQ0 813 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 OPTNQ96CV9 577 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 FUCA2Q9BTY2 467 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 TEX13BQ9BXU2 312 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 LRRC27Q9C0I9 530 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 DNAJC25Q9H1X3 360 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 ACAD9Q9H845 621 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 TTC12Q9H892 705 aaPredicted RBP9.08□□□□□ -0.96
HTT-209ENST00000512068 RMND1Q9NWS8 449 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 PCDHA12Q9UN75 941 aa9.08□□□□□ -0.96
HTT-209ENST00000512068 ZNF536O15090 1300 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 CYP3A7-CYP3A51PA0A087WV96 503 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 A0A0G2JLL6 359 aaPredicted RBP9.07□□□□□ -0.96
HTT-209ENST00000512068 SMTNL1A8MU46 457 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 SLC26A4O43511 780 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 MYL1P05976 194 aa9.07□□□□□ -0.96
HTT-209ENST00000512068 CYP3A4P08684 503 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms