RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 IQCA1Q86XH1 822 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 SMCR8Q8TEV9 937 aaPredicted RBP14.32□□□□□ -0.12
HMGB2-205ENST00000511316 NUP58Q9BVL2 599 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 EFCC1Q9HA90 598 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 MAGEF1Q9HAY2 307 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 BTBD7Q9P203 1132 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 TRIM17Q9Y577 477 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 SOWAHDA6NJG2 315 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 N4BP3O15049 544 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 TTLL1O95922 423 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 NDUFB10O96000 172 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 EEF1GP26641 437 aaKnown RBP14.31□□□□□ -0.12
HMGB2-205ENST00000511316 CALML3P27482 149 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 ATP2C1P98194 919 aaPredicted RBP14.31□□□□□ -0.12
HMGB2-205ENST00000511316 PAK1Q13153 545 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 COG2Q14746 738 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 KARSQ15046 597 aaKnown RBP14.31□□□□□ -0.12
HMGB2-205ENST00000511316 ABHD8Q96I13 439 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 RASSF4Q9H2L5 321 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 ANKZF1Q9H8Y5 726 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 LZTFL1Q9NQ48 299 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 ABHD10Q9NUJ1 306 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 FBXO28Q9NVF7 368 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 GJD2Q9UKL4 321 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 SYNPO2Q9UMS6 1093 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 PTPN22Q9Y2R2 807 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 IPO7O95373 1038 aaKnown RBP14.31□□□□□ -0.12
HMGB2-205ENST00000511316 LONP1P36776 959 aaKnown RBP14.31□□□□□ -0.12
HMGB2-205ENST00000511316 IRX3P78415 501 aaPredicted RBP14.31□□□□□ -0.12
HMGB2-205ENST00000511316 PKN2Q16513 984 aaKnown RBP14.31□□□□□ -0.12
HMGB2-205ENST00000511316 ZNF658Q5TYW1 1059 aaPredicted RBP14.31□□□□□ -0.12
HMGB2-205ENST00000511316 RAD9BQ6WBX8 426 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 TRMT44Q8IYL2 757 aaKnown RBP14.31□□□□□ -0.12
HMGB2-205ENST00000511316 NUP88Q99567 741 aaPredicted RBP14.31□□□□□ -0.12
HMGB2-205ENST00000511316 DESI2Q9BSY9 194 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 MYO6Q9UM54 1294 aa14.31□□□□□ -0.12
HMGB2-205ENST00000511316 ANO9A1A5B4 782 aa14.3□□□□□ -0.12
HMGB2-205ENST00000511316 TSPY2A6NKD2 308 aa14.3□□□□□ -0.12
HMGB2-205ENST00000511316 PPP1R3GB7ZBB8 358 aa14.3□□□□□ -0.12
HMGB2-205ENST00000511316 ECM2O94769 699 aaPredicted RBP14.3□□□□□ -0.12
HMGB2-205ENST00000511316 DSG3P32926 999 aa14.3□□□□□ -0.12
HMGB2-205ENST00000511316 LMAN1P49257 510 aa14.3□□□□□ -0.12
HMGB2-205ENST00000511316 ATP2B2Q01814 1243 aa14.3□□□□□ -0.12
HMGB2-205ENST00000511316 GMCL1P1Q8NEA9 526 aa14.3□□□□□ -0.12
HMGB2-205ENST00000511316 CCDC47Q96A33 483 aaKnown RBP14.3□□□□□ -0.12
HMGB2-205ENST00000511316 PORCNQ9H237 461 aa14.3□□□□□ -0.12
HMGB2-205ENST00000511316 TOMM22Q9NS69 142 aa14.3□□□□□ -0.12
HMGB2-205ENST00000511316 GABRQQ9UN88 632 aa14.3□□□□□ -0.12
HMGB2-205ENST00000511316 KCNJ14Q9UNX9 436 aa14.3□□□□□ -0.12
HMGB2-205ENST00000511316 MYH6P13533 1939 aa14.3□□□□□ -0.12
HMGB2-205ENST00000511316 WDR46O15213 610 aaKnown RBP14.29□□□□□ -0.12
HMGB2-205ENST00000511316 GYPCP04921 128 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 CASP14P31944 242 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 AARSP49588 968 aaKnown RBP eCLIP14.29□□□□□ -0.121e-323■■□□□ 12.8
HMGB2-205ENST00000511316 RRP12Q5JTH9 1297 aaKnown RBP14.29□□□□□ -0.12
HMGB2-205ENST00000511316 TTC38Q5R3I4 469 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 FAM83BQ5T0W9 1011 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 FBXO46Q6PJ61 603 aaPredicted RBP14.29□□□□□ -0.12
HMGB2-205ENST00000511316 LRRC47Q8N1G4 583 aaKnown RBP14.29□□□□□ -0.12
HMGB2-205ENST00000511316 REPS2Q8NFH8 660 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 SYMPKQ92797 1274 aaKnown RBP14.29□□□□□ -0.12
HMGB2-205ENST00000511316 TSGA10Q9BZW7 698 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 CUEDC2Q9H467 287 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 SH2D4AQ9H788 454 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 TMEM51Q9NW97 253 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 HOXC10Q9NYD6 342 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 KRT86O43790 486 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 CYLC1P35663 651 aaPredicted RBP14.29□□□□□ -0.12
HMGB2-205ENST00000511316 COPB1P53618 953 aaKnown RBP14.29□□□□□ -0.12
HMGB2-205ENST00000511316 ERVK-9P63128 1117 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 ERVK-24P63145 666 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 GOLGA8FQ08AF8 430 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 GOLGA8DPQ0D2H9 430 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 KCNB1Q14721 858 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 SEC23AQ15436 765 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 FAM114A1Q8IWE2 563 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 CCDC170Q8IYT3 715 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 GPRC5AQ8NFJ5 357 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 OR8K1Q8NGG5 319 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 ANKS1AQ92625 1134 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 TMEM47Q9BQJ4 181 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 MYL10Q9BUA6 226 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 THAP9Q9H5L6 903 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 SENP2Q9HC62 589 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 SH3GLB2Q9NR46 395 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 SRRDQ9UH36 339 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 RABGAP1Q9Y3P9 1069 aa14.29□□□□□ -0.12
HMGB2-205ENST00000511316 LAD1O00515 517 aa14.28□□□□□ -0.12
HMGB2-205ENST00000511316 CLSTN1O94985 981 aa14.28□□□□□ -0.12
HMGB2-205ENST00000511316 GNRH1P01148 92 aa14.28□□□□□ -0.12
HMGB2-205ENST00000511316 NR5A1Q13285 461 aa14.28□□□□□ -0.12
HMGB2-205ENST00000511316 CASP8Q14790 479 aa14.28□□□□□ -0.12
HMGB2-205ENST00000511316 KRT31Q15323 416 aa14.28□□□□□ -0.12
HMGB2-205ENST00000511316 TCP11X2Q5H9J9 407 aa14.28□□□□□ -0.12
HMGB2-205ENST00000511316 GALNT17Q6IS24 598 aa14.28□□□□□ -0.12
HMGB2-205ENST00000511316 SLC35F6Q8N357 371 aa14.28□□□□□ -0.12
HMGB2-205ENST00000511316 NUP133Q8WUM0 1156 aa14.28□□□□□ -0.12
HMGB2-205ENST00000511316 ATG4CQ96DT6 458 aa14.28□□□□□ -0.12
HMGB2-205ENST00000511316 MED15Q96RN5 788 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms