RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 ZNF713Q8N859 430 aaPredicted RBP13.94□□□□□ -0.18
CLDND1-223ENST00000511081 CAGE1Q8TC20 777 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 GPRASP2Q96D09 838 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 RIC8AQ9NPQ8 531 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 BARHL2Q9NY43 387 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 PCDHA6Q9UN73 950 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 PCDHA8Q9Y5H6 950 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 TET1Q8NFU7 2136 aa13.94□□□□□ -0.18
CLDND1-223ENST00000511081 CCDC196A0A1B0GTZ2 297 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 GOLGA8AA7E2F4 631 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 GOLGA8BA8MQT2 603 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 FOSP01100 380 aaPredicted RBP13.93□□□□□ -0.18
CLDND1-223ENST00000511081 ITGB5P18084 799 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 PSMA5P28066 241 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 APOBRQ0VD83 1088 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 HIC1Q14526 733 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 NTRK3Q16288 839 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 UBE2SQ16763 222 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 TRIM71Q2Q1W2 868 aaKnown RBP13.93□□□□□ -0.18
CLDND1-223ENST00000511081 CYFIP1Q7L576 1253 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 HEATR3Q7Z4Q2 680 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 NLRX1Q86UT6 975 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 C7orf31Q8N865 590 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 RETREG2Q8NC44 543 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 GIMAP8Q8ND71 665 aaPredicted RBP13.93□□□□□ -0.18
CLDND1-223ENST00000511081 AFAP1L1Q8TED9 768 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 DHX38Q92620 1227 aaKnown RBP13.93□□□□□ -0.18
CLDND1-223ENST00000511081 BRF1Q92994 677 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 CDHR1Q96JP9 859 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 GPR20Q99678 358 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 TM6SF1Q9BZW5 370 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 ZSWIM6Q9HCJ5 1215 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 SCN5AQ14524 2016 aa13.93□□□□□ -0.18
CLDND1-223ENST00000511081 H3BRB1 525 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 STXBP3O00186 592 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 ATP9AO75110 1047 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 ZNF286BP0CG31 522 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 KCNA2P16389 499 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 DNAJB2P25686 324 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 CLK2P49760 499 aaKnown RBP13.92□□□□□ -0.18
CLDND1-223ENST00000511081 PTK7Q13308 1070 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 PFKFB3Q16875 520 aaPredicted RBP13.92□□□□□ -0.18
CLDND1-223ENST00000511081 RUFY3Q7L099 469 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 OTOP2Q7RTS6 562 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 CDX2Q99626 313 aaPredicted RBP13.92□□□□□ -0.18
CLDND1-223ENST00000511081 ALG1Q9BT22 464 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 PBX4Q9BYU1 374 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 GLT8D2Q9H1C3 349 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 MTIF3Q9H2K0 278 aaKnown RBP13.92□□□□□ -0.18
CLDND1-223ENST00000511081 TUT1Q9H6E5 874 aaKnown RBP13.92□□□□□ -0.18
CLDND1-223ENST00000511081 JADE2Q9NQC1 790 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 TELO2Q9Y4R8 837 aa13.92□□□□□ -0.18
CLDND1-223ENST00000511081 DOCK5Q9H7D0 1870 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 SMCO2A6NFE2 343 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 SPDYE3A6NKU9 549 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 GRXCR1A8MXD5 290 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 PRPF3O43395 683 aaKnown RBP13.91□□□□□ -0.18
CLDND1-223ENST00000511081 PARNO95453 639 aaKnown RBP13.91□□□□□ -0.18
CLDND1-223ENST00000511081 LGALS2P05162 132 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 PDIA3P30101 505 aaKnown RBP13.91□□□□□ -0.18
CLDND1-223ENST00000511081 METAP2P50579 478 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLDND1-223ENST00000511081 NAPAP54920 295 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 ADAM17P78536 824 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 PKN1Q16512 942 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 TRAF7Q6Q0C0 670 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 SERINC5Q86VE9 423 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 CCDC155Q8N6L0 562 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 FAM161BQ96MY7 647 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 NOD1Q9Y239 953 aa13.91□□□□□ -0.18
CLDND1-223ENST00000511081 ESYT2A0FGR8 921 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 SORBS3O60504 671 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 CXCL10P02778 98 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 CKBP12277 381 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 SELPP16109 830 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 PBX2P40425 430 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 CHMP4BP1P59074 171 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 FGD1P98174 961 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 ZNF200P98182 395 aaPredicted RBP13.9□□□□□ -0.18
CLDND1-223ENST00000511081 CRYGNQ8WXF5 182 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 TIFAQ96CG3 184 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 MXRA8Q9BRK3 442 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 RNPEPQ9H4A4 650 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 SLC4A7Q9Y6M7 1214 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 MYO9BQ13459 2157 aa13.9□□□□□ -0.18
CLDND1-223ENST00000511081 TANC1Q9C0D5 1861 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 GSTTP1A0A1W2PQM5 241 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 MEIS1O00470 390 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 NOP56O00567 594 aaKnown RBP13.89□□□□□ -0.19
CLDND1-223ENST00000511081 SCG2P13521 617 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 IFNAR1P17181 557 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 SREBF1P36956 1147 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 CLCN6P51797 869 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 ADCY7P51828 1080 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 AP3B2Q13367 1082 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 TOB2Q14106 344 aaPredicted RBP13.89□□□□□ -0.19
CLDND1-223ENST00000511081 LRRC8DQ7L1W4 858 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 DEFB128Q7Z7B8 93 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 CYP2W1Q8TAV3 490 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 PHOSPHO2Q8TCD6 241 aa13.89□□□□□ -0.19
CLDND1-223ENST00000511081 SEPT1Q8WYJ6 367 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms