RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 PTCH2Q9Y6C5 1203 aa5□□□□□ -1.61
OTUD4-207ENST00000509517 BLACEA4D250 179 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 SRGAP3O43295 1099 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 PPP1R11O60927 126 aaPredicted RBP4.99□□□□□ -1.61
OTUD4-207ENST00000509517 LCP1P13796 627 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 SUMO1P63165 101 aaKnown RBP4.99□□□□□ -1.61
OTUD4-207ENST00000509517 RGL3Q3MIN7 710 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 ZC3H12BQ5HYM0 836 aaKnown RBP4.99□□□□□ -1.61
OTUD4-207ENST00000509517 SCUBE1Q8IWY4 988 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 RCBTB1Q8NDN9 531 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 ZSWIM2Q8NEG5 633 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 DPF3Q92784 378 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 KISS1RQ969F8 398 aaPredicted RBP4.99□□□□□ -1.61
OTUD4-207ENST00000509517 MTA3Q9BTC8 594 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 DHRS4Q9BTZ2 278 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 CD248Q9HCU0 757 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 FBLN5Q9UBX5 448 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 MRPS23Q9Y3D9 190 aaKnown RBP4.99□□□□□ -1.61
OTUD4-207ENST00000509517 RWDD3Q9Y3V2 267 aa4.99□□□□□ -1.61
OTUD4-207ENST00000509517 MYO1BO43795 1136 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 C6orf222P0C671 652 aaPredicted RBP4.98□□□□□ -1.61
OTUD4-207ENST00000509517 RBM10P98175 930 aaKnown RBP4.98□□□□□ -1.61
OTUD4-207ENST00000509517 SQSTM1Q13501 440 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 RSPO2Q6UXX9 243 aaPredicted RBP4.98□□□□□ -1.61
OTUD4-207ENST00000509517 NLRP10Q86W26 655 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 PALM2Q8IXS6 379 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 Q8N1Y9 231 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 LZTR1Q8N653 840 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 SH3TC2Q8TF17 1288 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 DCAF4Q8WV16 495 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 IPO9Q96P70 1041 aaKnown RBP4.98□□□□□ -1.61
OTUD4-207ENST00000509517 PHF20Q9BVI0 1012 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 KLC2Q9H0B6 622 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 KANSL2Q9H9L4 492 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 GPR27Q9NS67 375 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.98□□□□□ -1.61
OTUD4-207ENST00000509517 NTMQ9P121 344 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 C11orf21Q9P2W6 132 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 FBXL7Q9UJT9 491 aa4.98□□□□□ -1.61
OTUD4-207ENST00000509517 TIMM13Q9Y5L4 95 aaPredicted RBP4.98□□□□□ -1.61
OTUD4-207ENST00000509517 ZNF536O15090 1300 aa4.97□□□□□ -1.61
OTUD4-207ENST00000509517 MSCO60682 206 aa4.97□□□□□ -1.61
OTUD4-207ENST00000509517 GLI4P10075 376 aa4.97□□□□□ -1.61
OTUD4-207ENST00000509517 GTF2A2P52657 109 aa4.97□□□□□ -1.61
OTUD4-207ENST00000509517 RPL11P62913 178 aaKnown RBP4.97□□□□□ -1.61
OTUD4-207ENST00000509517 STYK1Q6J9G0 422 aa4.97□□□□□ -1.61
OTUD4-207ENST00000509517 KCNT2Q6UVM3 1135 aa4.97□□□□□ -1.61
OTUD4-207ENST00000509517 JAZF1Q86VZ6 243 aa4.97□□□□□ -1.61
OTUD4-207ENST00000509517 PLEKHO2Q8TD55 490 aa4.97□□□□□ -1.61
OTUD4-207ENST00000509517 ALG3Q92685 438 aa4.97□□□□□ -1.61
OTUD4-207ENST00000509517 ZBTB8AQ96BR9 441 aa4.97□□□□□ -1.61
OTUD4-207ENST00000509517 RNPC3Q96LT9 517 aaKnown RBP4.97□□□□□ -1.61
OTUD4-207ENST00000509517 MARCH2Q9P0N8 246 aa4.97□□□□□ -1.61
OTUD4-207ENST00000509517 A0A1W2PQJ5 194 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 FUCA1P04066 466 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 FPR2P25090 351 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 BCL6P41182 706 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 ZNF585AQ6P3V2 769 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 GLB1LQ6UWU2 654 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 USP51Q70EK9 711 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 NOP9Q86U38 636 aaKnown RBP4.96□□□□□ -1.62
OTUD4-207ENST00000509517 TEX2Q8IWB9 1127 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 DDX11Q96FC9 970 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 ZFYVE21Q9BQ24 234 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 WDR26Q9H7D7 661 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 TMEM260Q9NX78 707 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 BTG4Q9NY30 223 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 PPP4R1LQ9P1A2 415 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 PCDHA2Q9Y5H9 948 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 ASXL2Q76L83 1435 aa4.96□□□□□ -1.62
OTUD4-207ENST00000509517 CCDC163A0A0D9SF12 145 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 GPR85P60893 370 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 GABREP78334 506 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 LSAMPQ13449 338 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 WWC2Q6AWC2 1192 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 MCTP2Q6DN12 878 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 LBX2Q6XYB7 198 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 MAMDC2Q7Z304 686 aaPredicted RBP4.95□□□□□ -1.62
OTUD4-207ENST00000509517 CABP7Q86V35 215 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 ZNF575Q86XF7 245 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 NETO2Q8NC67 525 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.95□□□□□ -1.62
OTUD4-207ENST00000509517 USP33Q8TEY7 942 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 PTPRN2Q92932 1015 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 WWC2-AS2Q96NR7 200 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 CDIP1Q9H305 208 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 DBR1Q9UK59 544 aaKnown RBP4.95□□□□□ -1.62
OTUD4-207ENST00000509517 TRAF6Q9Y4K3 522 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 TNFRSF18Q9Y5U5 241 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 MRPL42Q9Y6G3 142 aaKnown RBP4.95□□□□□ -1.62
OTUD4-207ENST00000509517 X6R8D5 127 aa4.95□□□□□ -1.62
OTUD4-207ENST00000509517 ESYT3A0FGR9 886 aa4.94□□□□□ -1.62
OTUD4-207ENST00000509517 C22orf46C9J442 243 aa4.94□□□□□ -1.62
OTUD4-207ENST00000509517 H7BY64 318 aa4.94□□□□□ -1.62
OTUD4-207ENST00000509517 GPR42O15529 346 aa4.94□□□□□ -1.62
OTUD4-207ENST00000509517 NTRK1P04629 796 aa4.94□□□□□ -1.62
OTUD4-207ENST00000509517 TRIM61Q5EBN2 209 aa4.94□□□□□ -1.62
OTUD4-207ENST00000509517 IGFL4Q6B9Z1 124 aa4.94□□□□□ -1.62
OTUD4-207ENST00000509517 TTLL7Q6ZT98 887 aa4.94□□□□□ -1.62
OTUD4-207ENST00000509517 CEP68Q76N32 757 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms