RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MMADHCQ9H3L0 296 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ARMT1Q9H993 441 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ZSWIM6Q9HCJ5 1215 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 RAB6BQ9NRW1 208 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CHCHD3Q9NX63 227 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 AASSQ9UDR5 926 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ITGB1BP2Q9UKP3 347 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 FAM184BQ9ULE4 1060 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 PARP3Q9Y6F1 533 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 COL5A3P25940 1745 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 KIF3CO14782 793 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 SCAMP1O15126 338 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CFBP00751 764 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ADSLP30566 484 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CCNFP41002 786 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 TTC39AQ5SRH9 613 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 TSHZ3Q63HK5 1081 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 METTL16Q86W50 562 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 SPICE1Q8N0Z3 855 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 C10orf53Q8N6V4 93 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 PJA1Q8NG27 643 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 EPS8L3Q8TE67 593 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 AGBL1Q96MI9 1066 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 TSPAN10Q9H1Z9 355 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 MBIPQ9NS73 344 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ZSCAN32Q9NX65 697 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ORC3Q9UBD5 711 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 KIAA1024Q9UPX6 916 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 THSD7AQ9UPZ6 1657 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 TJP1Q07157 1748 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 FRMD3A2A2Y4 597 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ENPP3O14638 875 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 IPO7O95373 1038 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 BAG2O95816 211 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 SRGAP2CP0DJJ0 459 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CYP2C19P33261 490 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 HSPA1LP34931 641 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 PSMA6P60900 246 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 HAND2P61296 217 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 SYNE3Q6ZMZ3 975 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ZNF713Q8N859 430 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 APPL2Q8NEU8 664 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 PSMA8Q8TAA3 256 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 TATDN2Q93075 761 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ELMO3Q96BJ8 720 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 THAP11Q96EK4 314 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 ZMAT2Q96NC0 199 aaKnown RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 NUDT12Q9BQG2 462 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CRB3Q9BUF7 120 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 SENP6Q9GZR1 1112 aaPredicted RBP4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CCDC68Q9H2F9 335 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 CENPHQ9H3R5 247 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 IFT22Q9H7X7 185 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 SYNPO2Q9UMS6 1093 aa4.32□□□□□ -1.72
NEDD4-209ENST00000508871 HEG1Q9ULI3 1381 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 B2RBV5 119 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 EIF3FO00303 357 aaPredicted RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PARP1P09874 1014 aaKnown RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 ATP6V1B1P15313 513 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 CD44P16070 742 aaKnown RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 DNM2P50570 870 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PURAQ00577 322 aaKnown RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 TNFAIP2Q03169 654 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 CHAF1BQ13112 559 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 HYIQ5T013 277 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 SULT6B1Q6IMI4 303 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 HIBCHQ6NVY1 386 aaPredicted RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 ATF7IPQ6VMQ6 1270 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 SPATC1Q76KD6 591 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 KLHL7Q8IXQ5 586 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 RHPN1Q8TCX5 695 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 SMARCC1Q92922 1105 aaPredicted RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PNPLA8Q9NP80 782 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 CASS4Q9NQ75 786 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 CHRAC1Q9NRG0 131 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 ARGLU1Q9NWB6 273 aaPredicted RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 SUFUQ9UMX1 484 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 DNM3Q9UQ16 869 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 DOT1LQ8TEK3 1739 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PPP1R3GB7ZBB8 358 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PRRT4C9JH25 899 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 RASA4O43374 803 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 MTA2O94776 668 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PRPF6O94906 941 aaKnown RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 SERPINC1P01008 464 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PF4P02776 101 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 CCDC159P0C7I6 412 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PPARDQ03181 441 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 EXOSC9Q06265 439 aaKnown RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 TRPC3Q13507 836 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 ATP13A4Q4VNC1 1196 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 RGS9BPQ6ZS82 235 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 DDX54Q8TDD1 881 aaKnown RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 MKL1Q969V6 931 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 EPSTI1Q96J88 318 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 CCDC114Q96M63 670 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 DNAJC25Q9H1X3 360 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 ZNF624Q9P2J8 865 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms