RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 HOXD8P13378 290 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 THPOP40225 353 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 SP4Q02446 784 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 CCDC85BQ15834 202 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 UTP14CQ5TAP6 766 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 PCNX4Q63HM2 1172 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 METTL7BQ6UX53 244 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 TMTC3Q6ZXV5 915 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 DHX32Q7L7V1 743 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 SGMS1Q86VZ5 419 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 SKAP1Q86WV1 359 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 HERC6Q8IVU3 1022 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 ATP6V0A1Q93050 837 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 VWCEQ96DN2 955 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 CCDC136Q96JN2 1154 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 CDHR1Q96JP9 859 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 INPP4AQ96PE3 977 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 TSPYL2Q9H2G4 693 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 RBM28Q9NW13 759 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 ZNF215Q9UL58 517 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 FRMPD4Q14CM0 1322 aa11.59□□□□□ -0.55
UBE2D3-227ENST00000508818 LAMA2P24043 3122 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 COL6A3P12111 3177 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 MEIS2O14770 477 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 ZBTB43O43298 467 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 TLL1O43897 1013 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 EFCAB14O75071 495 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 LGALS2P05162 132 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 CA3P07451 260 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 HMGB1P09429 215 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 SMIM10L2AP0DMW4 78 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 SMIM10L2BP0DMW5 78 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 ZNF200P98182 395 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 IKBKEQ14164 716 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 RTN1Q16799 776 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 ZNF618Q5T7W0 954 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 CNKSR3Q6P9H4 555 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 DHX38Q92620 1227 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 SYMPKQ92797 1274 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 CTAGE1Q96RT6 745 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 SENP7Q9BQF6 1050 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 C16orf70Q9BSU1 422 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 COL25A1Q9BXS0 654 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 BCAS3Q9H6U6 928 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 EMSYQ7Z589 1322 aa11.58□□□□□ -0.56
UBE2D3-227ENST00000508818 ABHD14A-ACY1A0A1B0GW23 586 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 RSPH10B2B2RC85 870 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 GTPBP6O43824 516 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 RSPH10BP0C881 870 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 NAPAP54920 295 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 RBL2Q08999 1139 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 UBE2SQ16763 222 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 SERINC5Q86VE9 423 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 MICALL1Q8N3F8 863 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 GPRASP2Q96D09 838 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 TCEANC2Q96MN5 208 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 GPR20Q99678 358 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 CERS4Q9HA82 394 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 PKD2L1Q9P0L9 805 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 PCDHA6Q9UN73 950 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 PCDHA8Q9Y5H6 950 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 TRIP12Q14669 1992 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 SCN5AQ14524 2016 aa11.57□□□□□ -0.56
UBE2D3-227ENST00000508818 KLF18A0A0U1RQI7 1052 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 GOLGA8AA7E2F4 631 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 GOLGA8BA8MQT2 603 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 NBNO60934 754 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 LGR5O75473 907 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 CXCL10P02778 98 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 WDR5P61964 334 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 EXOSC10Q01780 885 aaKnown RBP11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 SEMA3FQ13275 785 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 MTMR1Q13613 665 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 ADGRE1Q14246 886 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 TSGA10IPQ3SY00 556 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 APOA5Q6Q788 366 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 USP38Q8NB14 1042 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 IL27Q8NEV9 243 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 ARNTL2Q8WYA1 636 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 GLG1Q92896 1179 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 RNPEPQ9H4A4 650 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 SETD4Q9NVD3 440 aa11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 V9GY48 417 aaPredicted RBP11.56□□□□□ -0.56
UBE2D3-227ENST00000508818 CCDC196A0A1B0GTZ2 297 aa11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 MAFGO15525 162 aa11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 TREHO43280 583 aa11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 FOSP01100 380 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 AMHP03971 560 aa11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 TCF7P36402 384 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 ZNF76P36508 570 aa11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 ADCY7P51828 1080 aa11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 ARHGAP4P98171 946 aa11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 COL9A3Q14050 684 aaPredicted RBP11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 SKIV2LQ15477 1246 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 TRIM71Q2Q1W2 868 aaKnown RBP11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 SEPT1Q8WYJ6 367 aa11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 SEPT8Q92599 483 aa11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 DCBLD2Q96PD2 775 aa11.55□□□□□ -0.56
UBE2D3-227ENST00000508818 GLT8D2Q9H1C3 349 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms